Basic Information

Assembly acc GCF_900116695.1
Acc NZ_LT703505.1
OriID ORI97227650
Organism Mycobacterium intracellulare subsp. chimaera
Topology Linear
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 6078679 nt
Chromosome GC content 67.66%
Indicator genes
  • dnaA      71... 1606nt
  • dnaN      2142... 3341nt
  • hemE      4211408... 4212481nt
  • hemB      5420110... 5421099nt
  • rpmH      6078004... 6078147nt
OriC location
  • 1607 ... 2141 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.3869

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207846 NZ_CP012885.2 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
2 ORI97208872 NZ_CP045963.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
3 ORI97227746 NZ_CP015272.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
4 ORI97227747 NZ_CP015278.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
5 ORI97227785 NZ_CP019221.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
6 ORI97254899 NZ_CP084592.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
7 ORI97254901 NZ_CP084586.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
8 ORI97207486 NZ_AP024245.1 Mycobacterium intracellulare 99.00% 100.00% Not linked
9 ORI97207508 NZ_AP024260.1 Mycobacterium intracellulare 99.00% 100.00% Not linked
10 ORI97207512 NZ_AP024264.1 Mycobacterium intracellulare 99.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_LT703505.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
71 1606 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaaATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnan
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCATCGTTCGTCCCCACTGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTTGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 83.27% 526 72 13 19 535 51 569 0.0 470.0
ORI10040011 83.04% 519 72 13 26 535 58 569 0.0 457.0
Found 2 BLAST matches
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