RefSeq NC_010912
DoriC accession number pORI00000140
OriC length 976 nt
OriC AT content 0.4723
The location of oriC region 3249..4224 nt
Browse in NCBI
OriC map
OriC sequences
TAGTTAGTCTTTGTAGAGACACAAACCTGAAATTCCGGACACCGCGCTTCAGGACATCTCCCTGGACGCCGATATCTGGCAGTATCCGGACGGTACTATCGAACGCCGGGCCAACGGTACTCCCCTGCCCTTTATGACTGACGACCGGCTATTTCACCCACGCACTTCTCCATGAAATTTAGCATCGTCGTGTCACGCCCCCAAACCTGCAAACCCAGCAGGGGCGGGGGCTGGCGGGGTGTTGGAAAAATCCATCCATGATTATCCAAGAATAATCCACTAGGCGCGGTTATCAGCGCCCTTGTGGGGCGCTGCTGCCCTTGCCCAATATGCCCGGCCAGAGGCCGGATAACTGATCTATCCGCTGCGCTAGGCTACACACCCGCCCCCACCGCTGCGCGGCAGGGGGAAAGGCGGGCAAAGCCCGCTAAACCCCACACCAAACCCGCAGTAATCCGCTGGAGCGATTTTAGCCGCTTTAGCGGCCTTTTCCCTACCCGAAGGGTGGGGGCGGTGTGCAGCCCCGAAGGGGCCATTTAGCGGCCATTTCAGCGGCTGTGATGCTGATAGTGGCCGTGGTGTCCCTTACGATATGGGAGTAATCAGGCTTGCCGAAAAGGGCTTTGAGTGGATCTGTCATGGCTGATCTCCAAACATATCAAGCGTGTCTGTATCCCACTCTATTGTAAACAAGACATTTTTATCTTTTATATTCAATGGCTTATTTTCCTGCTAATTGGTAATATCATGAAAAATACCATGCTCAGAAAAGGCTTAACAATATTTTGAAAAATTGCCTACTGAGCGCTGCCGCACAGCTCCATAGGCCGCTTTCCTGGCTTTGCTTCCAGATGTATGCTATTCTGCTCCTGCAGCTAATGGATCACCGCAAACAGGTTACTCGCCTGGGGATTCCCTTTCGACCCGAGCATCCGTATGAGACTCATGCTCGATTATTATTATTATAGAAGCCCCC
TAGTTAGTCTTTGTAGAGACACAAACCTGAAATTCCGGACACCGCGCTTCAGGACATCTCCCTGGACGCCGATATCTGGCAGTATCCGGACGGTACTATCGAACGCCGGGCCAACGGTACTCCCCTGCCCTTTATGACTGACGACCGGCTATTTCACCCACGCACTTCTCCATGAAATTTAGCATCGTCGTGTCACGCCCCCAAACCTGCAAACCCAGCAGGGGCGGGGGCTGGCGGGGTGTTGGAAAAATCCATCCATGATTATCCAAGAATAATCCACTAGGCGCGGTTATCAGCGCCCTTGTGGGGCGCTGCTGCCCTTGCCCAATATGCCCGGCCAGAGGCCGGATAACTGATCTATCCGCTGCGCTAGGCTACACACCCGCCCCCACCGCTGCGCGGCAGGGGGAAAGGCGGGCAAAGCCCGCTAAACCCCACACCAAACCCGCAGTAATCCGCTGGAGCGATTTTAGCCGCTTTAGCGGCCTTTTCCCTACCCGAAGGGTGGGGGCGGTGTGCAGCCCCGAAGGGGCCATTTAGCGGCCATTTCAGCGGCTGTGATGCTGATAGTGGCCGTGGTGTCCCTTACGATATGGGAGTAATCAGGCTTGCCGAAAAGGGCTTTGAGTGGATCTGTCATGGCTGATCTCCAAACATATCAAGCGTGTCTGTATCCCACTCTATTGTAAACAAGACATTTTTATCTTTTATATTCAATGGCTTATTTTCCTGCTAATTGGTAATATCATGAAAAATACCATGCTCAGAAAAGGCTTAACAATATTTTGAAAAATTGCCTACTGAGCGCTGCCGCACAGCTCCATAGGCCGCTTTCCTGGCTTTGCTTCCAGATGTATGCTATTCTGCTCCTGCAGCTAATGGATCACCGCAAACAGGTTACTCGCCTGGGGATTCCCTTTCGACCCGAGCATCCGTATGAGACTCATGCTCGATTATTATTATTATAGAAGCCCCC
AT-rich region
The information of repeat sequences

Motif GAAAAAT

StartP-valueSite
7883.80e-05ACAATATTTTGAAAAATTGCCTACTGA
7503.80e-05GTAATATCATGAAAAATACCATGCTCA
2453.80e-05CGGGGTGTTGGAAAAATCCATCCATGA
2707.82e-05GATTATCCAAGAATAATCCACTAGGCG

Motif CCCDWWADGVCCNTYBAGCGGCYNTTTCA

StartP-valueSite
5232.70e-13GGTGTGCAGCCCCGAAGGGGCCATTTAGCGGCCATTTCAGCGGCTGTGA
1282.94e-11TACTCCCCTGCCCTTTATGACTGACGACCGGCTATTTCACCCACGCACT
6113.90e-10AATCAGGCTTGCCGAAAAGGGCTTTGAGTGGATCTGTCATGGCTGATCT
4655.05e-10TCCGCTGGAGCGATTTTAGCCGCTTTAGCGGCCTTTTCCCTACCCGAAG
3246.85e-10GCTGCCCTTGCCCAATATGCCCGGCCAGAGGCCGGATAACTGATCTATC

Motif CAAACCYG

StartP-valueSite
4411.95e-05AACCCCACACCAAACCCGCAGTAATCCG
2023.61e-05GTCACGCCCCCAAACCTGCAAACCCAGC
223.61e-05TGTAGAGACACAAACCTGAAATTCCGGA
2105.46e-05CCCAAACCTGCAAACCCAGCAGGGGCGG
3789.45e-05CGCTAGGCTACACACCCGCCCCCACCGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000140 100.0 976 0 0 1 976 1 976 0.0 1803
pORI00000144 92.722 371 19 7 191 556 82 449 0.0 529
pORI00000362 91.419 303 23 3 191 491 104 405 0.0 412
pORI00000458 93.305 239 14 2 192 429 58 295 0.0 351
pORI00000093 98.99 99 1 0 878 976 1090 1188 1.4013e-45 178