RefSeq NC_008350
DoriC accession number pORI00000151
OriC length 264 nt
OriC AT content 0.6742
The location of oriC region 794..1057 nt
Browse in NCBI
OriC map
OriC sequences
AAAAAGGGGCTGAAAGCCCCTTGAGAAAGCCCCCGGAGGGGGGTTTCTTCTTATCTTGATACATATAGAAATAATGAGATTTTAAAAATAGGGTATCAAAATAGGTCTAAACCCTTGATTTTACTGGGTTTTCAGGCACAAAAAAAGCCTTGTTTTTTGTGAAAGCTTTTGATATAATTTAGGTGTTCAATCAAAATCATAAAAAGCTAGGAAAATTGCAAGGACTTTTTCTATATTTCTTTGTAATTACAGGTAAATTATAAC
AAAAAGGGGCTGAAAGCCCCTTGAGAAAGCCCCCGGAGGGGGGTTTCTTCTTATCTTGATACATATAGAAATAATGAGATTTTAAAAATAGGGTATCAAAATAGGTCTAAACCCTTGATTTTACTGGGTTTTCAGGCACAAAAAAAGCCTTGTTTTTTGTGAAAGCTTTTGATATAATTTAGGTGTTCAATCAAAATCATAAAAAGCTAGGAAAATTGCAAGGACTTTTTCTATATTTCTTTGTAATTACAGGTAAATTATAAC
AT-rich region
The information of repeat sequences

Motif ARMCCCTTG

StartP-valueSite
154.80e-07AGGGGCTGAAAGCCCCTTGAGAAAGCCCC
282.33e-06CCCTTGAGAAAGCCCCCGGAGGGGGGTTT
1098.35e-06AAATAGGTCTAAACCCTTGATTTTACTGG
1442.13e-05AGGCACAAAAAAAGCCTTGTTTTTTGTGA

Motif GGKKTTC

StartP-valueSite
415.15e-05CCCCGGAGGGGGGTTTCTTCTTATCTT
1821.06e-04ATATAATTTAGGTGTTCAATCAAAATC
1271.61e-04GATTTTACTGGGTTTTCAGGCACAAAA
912.54e-04TTTAAAAATAGGGTATCAAAATAGGTC
63.36e-04AAAAAGGGGCTGAAAGCCCCTT

Motif GCWAGG

StartP-valueSite
2061.07e-04ATCATAAAAAGCTAGGAAAATTGCAA
2182.21e-04TAGGAAAATTGCAAGGACTTTTTCTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000151 100.0 264 0 0 1 264 1 264 0.0 488
pORI00000150 75.277 271 51 14 2 264 224 486 3.95e-27 115
pORI00000251 100.0 29 0 0 43 71 1075 1103 8.74e-09 55