RefSeq NC_005923
DoriC accession number pORI00000006
OriC length 759 nt
OriC AT content 0.4954
The location of oriC region 6136..430 nt
Browse in NCBI
OriC map
OriC sequences
TCAGGACCGCTGCCGGAGCGCAACCCACTCACTACAGCAGAGCCATGTAGACAACATCCCCTCCCCCTTTCCACCGCGTCAGACGCCCGTAGCAGCCCGCTACGGGCTTTTTCATGCCCTGCCCTAGCGTCCAAGCCTCACGGCCGCGCTCGGCCTCTCTGGCGGCCTTCTGGCGCTCCTGCTGCGGCGTCCGCTCGTGGGCCGTGGCGCGGGTCCGCGCGCCGGCCTCGTGCGCCTGGCGCTCGCGGGCGAGGTCCAGGGCGGCCGTCTTCACGTTCTGCCTTGCGCAGATGAGATAGATCCCGGAATTCTAGAGCGGCCCCCATGTCAGCCGTTAAGTGTTCCTGTGTCACTCAAAATTGCTTTGAGAGGCTCTAAGGGCTTCTCAGTGCGTTACATCCCTGGCTTGTTGTCCACAACCGTTAAACCTTAAAAGCTTTAAAAGCCTTATATATTCTTTTTTTTCTTATAAAACTTAAAACCTTAGAGGCTATTTAAGTTGCTGATTTATATTAATTTTATTGTTCAAACATGAGAGCTTAGTACGTGAAACATGAGAGCTTAGTACGTTAGCCATGAGAGCTTAGTACGTTAGCCATGAGGGTTTAGTTCGTTAAACATGAGAGCTTAGTACGTTAAACATGAGAGCTTAGTACGTGAAACATGAGAGCTTAGTACGTACTATCAACAGGTTGAACTGCTGATCTTCAGATCCGTCCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACAT
TCAGGACCGCTGCCGGAGCGCAACCCACTCACTACAGCAGAGCCATGTAGACAACATCCCCTCCCCCTTTCCACCGCGTCAGACGCCCGTAGCAGCCCGCTACGGGCTTTTTCATGCCCTGCCCTAGCGTCCAAGCCTCACGGCCGCGCTCGGCCTCTCTGGCGGCCTTCTGGCGCTCCTGCTGCGGCGTCCGCTCGTGGGCCGTGGCGCGGGTCCGCGCGCCGGCCTCGTGCGCCTGGCGCTCGCGGGCGAGGTCCAGGGCGGCCGTCTTCACGTTCTGCCTTGCGCAGATGAGATAGATCCCGGAATTCTAGAGCGGCCCCCATGTCAGCCGTTAAGTGTTCCTGTGTCACTCAAAATTGCTTTGAGAGGCTCTAAGGGCTTCTCAGTGCGTTACATCCCTGGCTTGTTGTCCACAACCGTTAAACCTTAAAAGCTTTAAAAGCCTTATATATTCTTTTTTTTCTTATAAAACTTAAAACCTTAGAGGCTATTTAAGTTGCTGATTTATATTAATTTTATTGTTCAAACATGAGAGCTTAGTACGTGAAACATGAGAGCTTAGTACGTTAGCCATGAGAGCTTAGTACGTTAGCCATGAGGGTTTAGTTCGTTAAACATGAGAGCTTAGTACGTTAAACATGAGAGCTTAGTACGTGAAACATGAGAGCTTAGTACGTACTATCAACAGGTTGAACTGCTGATCTTCAGATCCGTCCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACAT
AT-rich region
The information of repeat sequences

Motif AAACATGAGAGCTTAGTACGT

StartP-valueSite
6601.40e-13TTAGTACGTGAAACATGAGAGCTTAGTACGTACTATCAACA
6381.40e-13TTAGTACGTTAAACATGAGAGCTTAGTACGTGAAACATGAG
6161.40e-13TTAGTTCGTTAAACATGAGAGCTTAGTACGTTAAACATGAG
5501.40e-13TTAGTACGTGAAACATGAGAGCTTAGTACGTTAGCCATGAG
5281.40e-13TTTATTGTTCAAACATGAGAGCTTAGTACGTGAAACATGAG

Motif CCTBDCVNYCGCGNBCGRCSYCCVTGGCRGCCBTCTDSNGBTYCTG

StartP-valueSite
2351.31e-19GCCTCGTGCGCCTGGCGCTCGCGGGCGAGGTCCAGGGCGGCCGTCTTCACGTTCTGCCTTGCGCAG
1361.33e-17AGCGTCCAAGCCTCACGGCCGCGCTCGGCCTCTCTGGCGGCCTTCTGGCGCTCCTGCTGCGGCGTC
3021.09e-16TGAGATAGATCCCGGAATTCTAGAGCGGCCCCCATGTCAGCCGTTAAGTGTTCCTGTGTCACTCAA
665.79e-16ATCCCCTCCCCCTTTCCACCGCGTCAGACGCCCGTAGCAGCCCGCTACGGGCTTTTTCATGCCCTG

Motif AAACCTTA

StartP-valueSite
4791.31e-05ATAAAACTTAAAACCTTAGAGGCTATTT
4251.31e-05CACAACCGTTAAACCTTAAAAGCTTTAA
4712.43e-05TTTTTCTTATAAAACTTAAAACCTTAGA
4436.41e-05AAAGCTTTAAAAGCCTTATATATTCTTT
5791.13e-04GTTAGCCATGAGAGCTTAGTACGTTAGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000006 100.0 759 0 0 1 759 1 759 0.0 1402
pORI00000006 97.872 47 0 1 635 680 524 570 4.33e-16 81
pORI00000006 97.872 47 0 1 524 570 635 680 4.33e-16 81
pORI00000018 100.0 302 0 0 1 302 1656 1355 0.0 558
pORI00000546 84.242 165 26 0 550 714 902 1066 1.50001e-40 161
pORI00000546 91.667 48 3 1 524 571 987 1033 1.21e-11 66