RefSeq GCF_000168355.3
Accession number NZ_CP002007.2
DoriC accession number ORI97010831
OriC length 152 nt
OriC AT content 0.697368
The location of oriC region 1375..1526 nt
Browse in NCBI
OriC map
OriC sequences
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaaCCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnan
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
dnaACCTGTGTATAACTTTTTTAAAAAACTCTGTTTTTCCACAAGTTGTGAACAAGTTAATTTCCGCAGTTTTATTGGTCTTTCATCACTTTTCCACAGAATACACAGAGACTACTATTACTATTAACCTTATAGATAATAAATAAAGGAGAATCCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TCCACAG

StartP-valueSite
893.13e-05TCATCACTTTTCCACAGAATACACAGA
594.27e-05CAAGTTAATTTCCGCAGTTTTATTGGT
989.87e-05TTCCACAGAATACACAGAGACTACTAT
342.04e-04ACTCTGTTTTTCCACAAGTTGTGAACA

Motif SYTGTG

StartP-valueSite
11.10e-04.CCTGTGTATAACTTTT
411.94e-04TTTTCCACAAGTTGTGAACAAGTTAA

Motif AASRAG

StartP-valueSite
1426.71e-05ATAATAAATAAAGGAGAATCC
476.31e-04ACAAGTTGTGAACAAGTTAATTTCCG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96010273 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010182 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010178 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010176 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010174 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010172 99.346 153 0 1 1 152 1 153 0.0 276
ORI94010840 99.346 153 0 1 1 152 1 153 0.0 276
ORI93010564 99.346 153 0 1 1 152 1 153 0.0 276
ORI93010562 99.346 153 0 1 1 152 1 153 0.0 276
ORI93010560 99.346 153 0 1 1 152 1 153 0.0 276
ORI90010298 99.346 153 0 1 1 152 1 153 0.0 276
ORI90010296 99.346 153 0 1 1 152 1 153 0.0 276
ORI96010222 98.701 154 0 2 1 152 1 154 0.0 272
ORI96010180 97.386 153 3 1 1 152 1 153 0.0 259