RefSeq NC_023010.2
DoriC accession number aORI10010245
OriC length 821 nt
OriC AT content 0.4592
The location of oriC region 362388..0 nt
Browse in NCBI
OriC map
OriC sequences
TGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
TGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
TGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
ORB     AT-rich region
The information of repeat sequences

Motif CCCCYCNBHTTTCACGAGAGTY

StartP-valueSite
3033.16e-14TTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGC
2473.84e-12AGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCC
6054.57e-12ATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGG
7744.39e-09GCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATC
1344.63e-09TTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAG

Motif CTTGCTG

StartP-valueSite
6625.99e-05TCTGACGCTTCTTGCTGAGTTTCCACT
5685.99e-05TCCTTTCTGCCTTGCTGAATAGAAGAG
2185.99e-05TTGATAGTGTCTTGCTGTATCGGCCGT
5601.29e-04TTGAGGTCTCCTTTCTGCCTTGCTGAA

Motif CHGAHCCWAACDBATKACDBAKGBBGBKTAGWTVAAC

StartP-valueSite
1706.43e-15GATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTG
6901.01e-14GAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAA
3342.61e-13TTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTC
351.77e-12CATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010245 100.0 821 0 0 1 821 1 821 0.0 1517
aORI10010180 100.0 821 0 0 1 821 43 863 0.0 1517
aORI10010129 88.01 834 62 15 2 820 943 133 0.0 952