RefSeq NC_015943.1
DoriC accession number aORI10010180
OriC length 863 nt
OriC AT content 0.5319
The location of oriC region 488056..488918 nt
Browse in NCBI
OriC map
OriC sequences
CGTGTGGAGCCGCCGGCTGCGAGGGCTGCACAAAACGAACATTGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
CGTGTGGAGCCGCCGGCTGCGAGGGCTGCACAAAACGAACATTGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
CGTGTGGAGCCGCCGGCTGCGAGGGCTGCACAAAACGAACATTGTGGGCAATAGCTCAATCGCCTACATGATGTATTAGAACAAACAAGATGCCTGAGTTCGGTTAGATAAACAGATCTCTCATGTGGTACAGGGTGTGTGACCTGAATAATTTCAGCTGCGATGTTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAGATTTCCAACGCAAACACGCTACGCAGGCGGCGTAGTTCAACTTTGATAGTGTCTTGCTGTATCGGCCGTAGAGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCCAGTGAACCGGCATTTTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGCAGCTCCTAACTCATGAAATGTGGGGTGTAGTTGAGCAGAGCAAGTCATCAATTGTGTAGTAACTCAGAGAAAGCACGGAGTCTAGACAGTGAGTGGAGAGGGATTGATGGTCTCTCAGGGAATCAAATACAGAGCAGCGCGACCGTAGACTCCTATGGATATAACCTACTAGCGATGGATATTGTTTGTTGACGACGATAACTGACCATGAGAAGTTGAGGTCTCCTTTCTGCCTTGCTGAATAGAAGAGACAGGTAGATATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGGAGGGAAGAAATAATGTCTGACGCTTCTTGCTGAGTTTCCACTAGAGAATTAAACTGAACCTAACGTATTACGGATGCTGTTTTGACCCACTTATATTAAATCTTCTTCTCATTCAGAGTTTCATTTTGCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATCTGGGGGGCGGGGGTTG
ORB     AT-rich region
The information of repeat sequences

Motif CCCCYCNBHTTTCACGAGAGTY

StartP-valueSite
3453.26e-14TTGTTGCCCACCCCCCACATTTCACGAGAGTTTAAGAATAGC
6473.94e-12ATCTCCCCCGCCCCCCATATTTCATGAGAGTTGCTATAGGGG
2893.94e-12AGAAGTGGGACCCCCCGGTTTTCACGAGAGTTAATATCGGCC
8164.43e-09GCCCTCTCTTCCCCTCCTCTCCAACGATACTCTCGTGAAATC
1764.43e-09TTATCTTTGATCTGTCTCTTTTCAGGAAAGTCTCCAGATGAG

Motif CGCMGGCKGCG

StartP-valueSite
112.51e-07CGTGTGGAGCCGCCGGCTGCGAGGGCTGCAC
2293.93e-07AAACACGCTACGCAGGCGGCGTAGTTCAACT

Motif CTTGCTG

StartP-valueSite
7045.92e-05TCTGACGCTTCTTGCTGAGTTTCCACT
6105.92e-05TCCTTTCTGCCTTGCTGAATAGAAGAG
2605.92e-05TTGATAGTGTCTTGCTGTATCGGCCGT
6021.24e-04TTGAGGTCTCCTTTCTGCCTTGCTGAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010180 100.0 863 0 0 1 863 1 863 0.0 1594
aORI10010245 100.0 821 0 0 43 863 1 821 0.0 1517
aORI10010129 88.01 834 62 15 44 862 943 133 0.0 952