RefSeq NC_006397.1
DoriC accession number aORI10010129
OriC length 944 nt
OriC AT content 0.5434
The location of oriC region 51486..52429 nt
Browse in NCBI
OriC map
OriC sequences
CGTATACCCGATAGATACAATCTATGTGAAATAAAACCACCGCTTCATGGGACTCATTTGTTTCATGAGATGCCCCCACTGCTTCATGAGACATATGCGTCGGTTTTCACATGAGTTGGGACGTTTTGCACTAACCCCCTCCCCCCAGATTTCACGAGAGTATCGTTAGAGAGGAGGGGAAGAGAGGGCAAAATGAAACTCTGAATGAGAAGAAGATTTAATACAGATAGATTAGAACAGGATCCGTAATACGTTAGGTTCAGTTTAATTCTCTAGTGAGGTCCCAGCAAGAAACGTCAGACATTATTTCTTCCCTCCCCTCCCCTACAGCAACTCTCATGAAATATGGGGGGAGGGGGAGAGATCAACCTGCATGAGTAAGGAGACATCAACTTCTCATGGATTGTCGCTAACAAACGACATCCATCGCTAGTAGCCTATATCCATAGGAATCTACGGTCGCGTTGCTCTTCATTTGATTCACTGAGAGACCATCAATCCCTCTCCACTCACTGTCTGGACTCCGTGCTTTCTCTGAGTTACTACACAATTGATGACCTGCTCTGTTCATACTACACCCCACATTTCATGAGTTAGGAGCTGCGCTGCTATTCTTGAACTCTCGTGAAATGTGGGGGGTGGGGAACAAAATTCCGGTTAACTGGTCCATATTAACTCTCGTGAAAACCGGGGGGTCCCACTTCTCCACGACCGATACAGCAAGACAGGCACTATCAGAGTTGAATTACGCCGCCTGTGTAGGTGTTTGCGTTGGAAGTCTCATCTGGAGGCTCTCATGAAAAGGGACAGATTAAACATAACATCGCAGCTGAAATTATTCAGGTCAGCTATCCTGTACCACATGAGACATCTGTTTATCTAACTGAACTCAGGCCTCCTGTTTGTTCTAATACATCATGTAGGCGATTGAGATATTGCCCACT
CGTATACCCGATAGATACAATCTATGTGAAATAAAACCACCGCTTCATGGGACTCATTTGTTTCATGAGATGCCCCCACTGCTTCATGAGACATATGCGTCGGTTTTCACATGAGTTGGGACGTTTTGCACTAACCCCCTCCCCCCAGATTTCACGAGAGTATCGTTAGAGAGGAGGGGAAGAGAGGGCAAAATGAAACTCTGAATGAGAAGAAGATTTAATACAGATAGATTAGAACAGGATCCGTAATACGTTAGGTTCAGTTTAATTCTCTAGTGAGGTCCCAGCAAGAAACGTCAGACATTATTTCTTCCCTCCCCTCCCCTACAGCAACTCTCATGAAATATGGGGGGAGGGGGAGAGATCAACCTGCATGAGTAAGGAGACATCAACTTCTCATGGATTGTCGCTAACAAACGACATCCATCGCTAGTAGCCTATATCCATAGGAATCTACGGTCGCGTTGCTCTTCATTTGATTCACTGAGAGACCATCAATCCCTCTCCACTCACTGTCTGGACTCCGTGCTTTCTCTGAGTTACTACACAATTGATGACCTGCTCTGTTCATACTACACCCCACATTTCATGAGTTAGGAGCTGCGCTGCTATTCTTGAACTCTCGTGAAATGTGGGGGGTGGGGAACAAAATTCCGGTTAACTGGTCCATATTAACTCTCGTGAAAACCGGGGGGTCCCACTTCTCCACGACCGATACAGCAAGACAGGCACTATCAGAGTTGAATTACGCCGCCTGTGTAGGTGTTTGCGTTGGAAGTCTCATCTGGAGGCTCTCATGAAAAGGGACAGATTAAACATAACATCGCAGCTGAAATTATTCAGGTCAGCTATCCTGTACCACATGAGACATCTGTTTATCTAACTGAACTCAGGCCTCCTGTTTGTTCTAATACATCATGTAGGCGATTGAGATATTGCCCACT
CGTATACCCGATAGATACAATCTATGTGAAATAAAACCACCGCTTCATGGGACTCATTTGTTTCATGAGATGCCCCCACTGCTTCATGAGACATATGCGTCGGTTTTCACATGAGTTGGGACGTTTTGCACTAACCCCCTCCCCCCAGATTTCACGAGAGTATCGTTAGAGAGGAGGGGAAGAGAGGGCAAAATGAAACTCTGAATGAGAAGAAGATTTAATACAGATAGATTAGAACAGGATCCGTAATACGTTAGGTTCAGTTTAATTCTCTAGTGAGGTCCCAGCAAGAAACGTCAGACATTATTTCTTCCCTCCCCTCCCCTACAGCAACTCTCATGAAATATGGGGGGAGGGGGAGAGATCAACCTGCATGAGTAAGGAGACATCAACTTCTCATGGATTGTCGCTAACAAACGACATCCATCGCTAGTAGCCTATATCCATAGGAATCTACGGTCGCGTTGCTCTTCATTTGATTCACTGAGAGACCATCAATCCCTCTCCACTCACTGTCTGGACTCCGTGCTTTCTCTGAGTTACTACACAATTGATGACCTGCTCTGTTCATACTACACCCCACATTTCATGAGTTAGGAGCTGCGCTGCTATTCTTGAACTCTCGTGAAATGTGGGGGGTGGGGAACAAAATTCCGGTTAACTGGTCCATATTAACTCTCGTGAAAACCGGGGGGTCCCACTTCTCCACGACCGATACAGCAAGACAGGCACTATCAGAGTTGAATTACGCCGCCTGTGTAGGTGTTTGCGTTGGAAGTCTCATCTGGAGGCTCTCATGAAAAGGGACAGATTAAACATAACATCGCAGCTGAAATTATTCAGGTCAGCTATCCTGTACCACATGAGACATCTGTTTATCTAACTGAACTCAGGCCTCCTGTTTGTTCTAATACATCATGTAGGCGATTGAGATATTGCCCACT
ORB     AT-rich region
The information of repeat sequences

Motif RACTCTCRTGAAADVBGRGGGG

StartP-valueSite
6182.29e-13GCTATTCTTGAACTCTCGTGAAATGTGGGGGGTGGGGAACAA
3322.11e-12CCCCTACAGCAACTCTCATGAAATATGGGGGGAGGGGGAGAG
6744.40e-12GGTCCATATTAACTCTCGTGAAAACCGGGGGGTCCCACTTCT
1581.04e-09GATTTCACGAGAGTATCGTTAGAGAGGAGGGGAAGAGAGGGC
7901.14e-09CTCATCTGGAGGCTCTCATGAAAAGGGACAGATTAAACATAA

Motif TTCATGAG

StartP-valueSite
5861.65e-05CACCCCACATTTCATGAGTTAGGAGCTG
831.65e-05CCCCCACTGCTTCATGAGACATATGCGT
621.65e-05ACTCATTTGTTTCATGAGATGCCCCCAC
3714.31e-05GAGATCAACCTGCATGAGTAAGGAGACA
444.31e-05AAACCACCGCTTCATGGGACTCATTTGT

Motif TGCGTTGSTHTTC

StartP-valueSite
6021.89e-07AGTTAGGAGCTGCGCTGCTATTCTTGAACTCTC
4613.56e-07AATCTACGGTCGCGTTGCTCTTCATTTGATTCA
963.56e-07ATGAGACATATGCGTCGGTTTTCACATGAGTTG
7685.05e-07TGTAGGTGTTTGCGTTGGAAGTCTCATCTGGAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010129 100.0 944 0 0 1 944 1 944 0.0 1744
aORI10010245 88.01 834 62 15 133 943 820 2 0.0 952
aORI10010180 88.01 834 62 15 133 943 862 44 0.0 952