RefSeq NC_016812.1
Accession number NC_016812.1
DoriC accession number ORI95030437
OriC length 406 nt
OriC AT content 0.497537
The location of oriC region 3803952..3804357 nt
Browse in NCBI
OriC map
OriC sequences
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemeTCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
hemETCGCCATTCCCCAATCTAAAAAACAAACCTTATTTAAAAGGTTTCTATTTCTTAGAGTCGGTGGCTATCAAGGATTAAAATCAATCCTCAGTTCGTCCAATCTGCGCAGATCTCCACGTGCGTGGCGGGAGAAGGATCACCCGAATTCATTATCGATCGGGCAAAGCCTAGAAAAGGCAGAAAAGTCAGCATCTTGCTGGACCCTCGGAATTTGCGATTCCTGTGGACAAGGAGTCGATCCGCGTGACAATTTGTCGTCGACTTGAGTCTTTTCCACAACTGCGCCTGAGCGTTTTTCGTTTGGGCGTCAATTGTGAATAACGCGACGTTTTTCCACGGGCCTGGGCGGCGACCGCGACTTAAGCCGTCTGGTGTCCCGGCCTATCAACAGCCCCCGGAGAATTGC-
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif AGAAAA

StartP-valueSite
1791.98e-04TAGAAAAGGCAGAAAAGTCAGCATCT
1701.98e-04GGCAAAGCCTAGAAAAGGCAGAAAAG

Motif AAAAWCAA

StartP-valueSite
191.22e-05CCCCAATCTAAAAAACAAACCTTATTTA
772.52e-05ATCAAGGATTAAAATCAATCCTCAGTTC

Motif GGASAAGGA

StartP-valueSite
1282.92e-06GTGCGTGGCGGGAGAAGGATCACCCGAAT
2256.01e-06CGATTCCTGTGGACAAGGAGTCGATCCGC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95030437 100.0 406 0 0 1 406 1 406 0.0 750
ORI92730253 91.4 407 32 3 1 406 1 405 0.0 555
ORI96000428 85.539 408 55 4 1 406 1 406 0.0 424
ORI96000439 75.545 413 68 28 10 406 10 405 4.76441e-44 172
ORI40030119 91.429 70 6 0 18 87 17 86 2.91e-21 97
ORI93040198 90.278 72 6 1 17 87 39 110 3.76e-20 94
ORI92740160 90.278 72 6 1 17 87 39 110 3.76e-20 94
ORI92540152 90.278 72 6 1 17 87 87 158 3.76e-20 94
ORI10040059 90.278 72 6 1 17 87 87 158 3.76e-20 94