RefSeq NC_009636.1
Accession number NC_009636.1
DoriC accession number ORI92030162
OriC length 405 nt
OriC AT content 0.493827
The location of oriC region 3384608..3385012 nt
Browse in NCBI
OriC map
OriC sequences
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemeTTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
hemETTGCCGCTTCCTAATATAAAAATAAAACTGAATTTATAAGGTTTCTATTTCTTAGAGTCGGTGAGTATCAAGGATTAAAATCGATCCTCGTTCCATCCAGTCCGCCTCGATCGCCGGCAATCGGCCGGGAGAGATTCCAGGCAGATCACGGCCCAAGCGGGGAAAATTTGGGAAAACGCGGTAAAGTCAGAGACTTGCCAAAGGCTAGCAGCTTGCGCTTCCTGTGAATGGGGAGTCGATCGCGTGACAATTTGTCTTGGCGATGAGTCTTTTCCACATGCAAGGGAAAGCGATTTCCTGCGGGGGTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATCAACAGACCGCGGAGAATTGC-
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TTKCCRCWTGC

StartP-valueSite
3316.70e-07ACTCGGCACTTTTCCACTTGCCTGATGGCAG
2711.13e-06CGATGAGTCTTTTCCACATGCAAGGGAAAGC
15.63e-06.TTGCCGCTTCCTAATATAAAA
2061.92e-05TGCCAAAGGCTAGCAGCTTGCGCTTCCTGTG
1951.92e-05AGTCAGAGACTTGCCAAAGGCTAGCAGCTTG

Motif TCGATC

StartP-valueSite
2362.36e-04GAATGGGGAGTCGATCGCGTGACAAT
1072.36e-04CCAGTCCGCCTCGATCGCCGGCAATC
812.36e-04AGGATTAAAATCGATCCTCGTTCCAT
924.49e-04CGATCCTCGTTCCATCCAGTCCGCCT

Motif TCCMGSCMKATCA

StartP-valueSite
3741.15e-08GCTGTTTTTGTCCCGCCCTATCAACAGACCGCG
1362.01e-07CGGGAGAGATTCCAGGCAGATCACGGCCCAAGC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92030162 100.0 405 0 0 1 405 1 405 0.0 749
ORI96000389 83.333 408 62 6 1 405 1 405 0.0 372
ORI96000388 83.333 408 62 6 1 405 1 405 0.0 372
ORI94030382 83.333 408 62 6 1 405 1 405 0.0 372
ORI10030017 83.333 408 62 6 1 405 73 477 0.0 372
ORI96000439 82.598 408 65 6 1 405 1 405 0.0 355