Basic Information

Assembly acc GCF_023278525.2
Acc NZ_CP076382.2
OriID ORI97257011
Organism Mycobacterium intracellulare ATCC 13950
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5346370 nt
Chromosome GC content 68.13%
Indicator genes
  • dnaN      1635314... 1636513nt
  • dnaA      1637049... 1638584nt
  • rpmH      1639187... 1639330nt
  • hemB      2297237... 2298226nt
  • hemE      3384053... 3385126nt
OriC location
  • 1636513 ... 1637048 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.39

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
2 ORI97207482 NZ_AP024243.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
3 ORI97207484 NZ_AP024244.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
4 ORI97207496 NZ_AP024253.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
5 ORI97207498 NZ_AP024254.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
6 ORI97207514 NZ_AP024265.1 Mycobacterium intracellulare M.i.198 100.00% 100.00% Not linked
7 ORI97209905 NZ_CP089222.1 Mycobacterium intracellulare subsp. intracellulare 100.00% 100.00% Not linked
8 ORI97226924 NC_016946.1 Mycobacterium intracellulare ATCC 13950 100.00% 100.00% Not linked
9 ORI97226925 NC_016947.1 Mycobacterium intracellulare MOTT-02 100.00% 100.00% Not linked
10 ORI97226952 NC_018612.1 Mycobacterium intracellulare subsp. intracellulare MTCC 9506 100.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP076382.2
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Replication Initiation Protein Information

Gene Start Gene End Translation
1637049 1638584 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnanAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaa
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 82.92% 527 72 15 1 517 569 51 0.0 459.0
ORI10040011 82.69% 520 72 15 1 510 569 58 0.0 446.0
Found 2 BLAST matches
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