Basic Information

Assembly acc GCF_004684285.1
Acc NZ_CP038470.1
OriID ORI97023447
Organism Dehalococcoides mccartyi
Topology Circular
Lineage Bacteria ; Bacillati ; Chloroflexota ; Dehalococcoidia ; Dehalococcoidales ; Dehalococcoidaceae ; Dehalococcoides ; Dehalococcoides mccartyi
Assembly Level Complete
Literature linkage Not linked
Chromosome size 1422358 nt
Chromosome GC content 47.02%
Indicator genes
  • dnaA      261... 1595nt
  • rpmH      856973... 857074nt
  • dnaN      1014485... 1015621nt
OriC location
  • 1596 ... 1925 nt
OriC Length
  • 330 nt
OriC AT Content
  • 0.703

Comparative Sequence Support

Recurrence category Multi-accession
Sequence cluster BC-OH000515
Cluster members 16
Distinct accessions 16
Species / genera 1 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI10010158 NC_007356.1 Dehalococcoides mccartyi CBDB1 100.00% 100.00% Not linked
2 ORI97016136 NZ_CP006951.1 Dehalococcoides mccartyi CG5 100.00% 100.00% Not linked
3 ORI97016284 NZ_CP011127.1 Dehalococcoides mccartyi 100.00% 100.00% Not linked
4 ORI97024230 NZ_AP024514.1 Dehalococcoides mccartyi 100.00% 100.00% Not linked
5 ORI97291243 NZ_AP028460.1 Dehalococcoides mccartyi 100.00% 100.00% Not linked
6 ORI97010106 NC_020387.1 Dehalococcoides mccartyi BTF08 99.60% 100.00% Not linked
7 ORI97016559 NZ_CP019867.1 Dehalococcoides mccartyi 99.60% 100.00% Not linked
8 ORI97016560 NZ_CP019868.1 Dehalococcoides mccartyi 99.60% 100.00% Not linked
9 ORI97016561 NZ_CP019946.1 Dehalococcoides mccartyi 99.60% 100.00% Not linked
10 ORI97016563 NZ_CP019969.1 Dehalococcoides mccartyi 99.60% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP038470.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
261 1595 MSIRPAQELWETALGEIELQ...

OriC Visualization

OriC map
OriC sequences
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaaTTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobge
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCATGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGCATTTACAGGTTTTTTCTATTCCTTTTCGACAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTTAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI90010302 100.00% 330 0 0 1 330 1 330 0.0 610.0
ORI10010158 100.00% 330 0 0 1 330 1 330 0.0 610.0
ORI93010642 99.40% 331 1 1 1 330 1 331 0.0 599.0
ORI93010614 85.89% 241 31 3 88 326 88 327 0.0 254.0
ORI10010023 83.66% 257 37 5 72 326 69 322 0.0 237.0
Found 5 BLAST matches
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