Basic Information

Assembly acc GCF_009939665.1
Acc NZ_CP035892.1
OriID ORI97018245
Organism Campylobacter jejuni
Topology Circular
Lineage Bacteria ; Pseudomonadati ; Campylobacterota ; Epsilonproteobacteria ; Campylobacterales ; Campylobacteraceae ; Campylobacter ; Campylobacter jejuni
Assembly Level Chromosome
Literature linkage Not linked
Chromosome size 1747233 nt
Chromosome GC content 30.54%
Indicator genes
  • dnaA      1... 1323nt
  • dnaN      1483... 2550nt
  • rpmH      977855... 977989nt
  • hemB      1002121... 1003104nt
  • gidA      1192852... 1194711nt
  • hemE      1248531... 1249553nt
OriC location
  • 1324 ... 1482 nt
OriC Length
  • 159 nt
OriC AT Content
  • 0.7799

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000030
Cluster members 289
Distinct accessions 289
Species / genera 12 / 1
Literature-linked members 1

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI10010008 NC_002163.1 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 100.00% 100.00% Linked
2 ORI70010266 NC_008787.1 Campylobacter jejuni subsp. jejuni 81-176 100.00% 100.00% Not linked
3 ORI96010655 NC_018709.2 Campylobacter jejuni subsp. jejuni PT14 100.00% 100.00% Not linked
4 ORI96010656 NC_018521.1 Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 100.00% 100.00% Not linked
5 ORI97018244 NZ_CP035891.1 Campylobacter jejuni 100.00% 100.00% Not linked
6 ORI97018246 NZ_CP035894.1 Campylobacter jejuni 100.00% 100.00% Not linked
7 ORI97018247 NZ_CP035895.1 Campylobacter jejuni 100.00% 100.00% Not linked
8 ORI97207004 NZ_CP058295.1 Campylobacter jejuni 100.00% 100.00% Not linked
9 ORI97207588 NZ_CP005388.1 Campylobacter jejuni subsp. jejuni CG8421 100.00% 100.00% Not linked
10 ORI97207592 NZ_CP006685.1 Campylobacter jejuni subsp. jejuni NCTC 11168-K12E5 100.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP035892.1
Open full view

Replication Initiation Protein Information

Gene Start Gene End Translation
1 1323 MNPSQILENLKKELNENEYE...

OriC Visualization

OriC map
OriC sequences
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaaGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnan
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
dnaAGTGAAAGGATGTGAAAAATAAATTCTAGAGTGTGAAAAAAAGAAATTAAGCAAAGTATGATAAAATACAAATTTGATTATTTTGCTTTGAAAAATTTCACAATTTCAACAAGCTTATTATTACAACGAATTTAAAATTAAAATAAACCAAGGAGAAAAAdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI96010655 100.00% 159 0 0 1 159 1 159 0.0 294.0
ORI96010656 100.00% 159 0 0 1 159 1 159 0.0 294.0
ORI70010266 100.00% 159 0 0 1 159 1 159 0.0 294.0
ORI10010008 100.00% 159 0 0 1 159 1 159 0.0 294.0
ORI96010654 99.37% 159 1 0 1 159 1 159 0.0 289.0
ORI96010688 99.37% 159 1 0 1 159 1 159 0.0 289.0
ORI94040277 99.37% 159 1 0 1 159 1 159 0.0 289.0
ORI92010341 99.37% 159 1 0 1 159 1 159 0.0 289.0
ORI10010064 99.37% 159 1 0 1 159 1 159 0.0 289.0
ORI96010687 98.74% 159 2 0 1 159 1 159 0.0 283.0
ORI92240122 98.11% 159 3 0 1 159 1 159 0.0 278.0
Found 11 BLAST matches
Return to browse page