Basic Information

Assembly acc GCF_000341655.1
Acc NC_020386.1
OriID ORI97010105
Organism Dehalococcoides mccartyi DCMB5
Topology Circular
Lineage Bacteria ; Bacillati ; Chloroflexota ; Dehalococcoidia ; Dehalococcoidales ; Dehalococcoidaceae ; Dehalococcoides ; Dehalococcoides mccartyi
Assembly Level Complete
Literature linkage Not linked
Chromosome size 1431902 nt
Chromosome GC content 47.07%
Indicator genes
  • dnaA      261... 1595nt
  • rpmH      936891... 937031nt
  • dnaN      1046149... 1047285nt
OriC location
  • 1596 ... 1926 nt
OriC Length
  • 331 nt
OriC AT Content
  • 0.7069

Comparative Sequence Support

Recurrence category Multi-accession
Sequence cluster BC-OH000515
Cluster members 16
Distinct accessions 16
Species / genera 1 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97016107 NZ_AP014563.1 Dehalococcoides mccartyi IBARAKI 100.00% 100.00% Not linked
2 ORI97016562 NZ_CP019968.1 Dehalococcoides mccartyi 99.60% 100.00% Not linked
3 ORI97016564 NZ_CP019999.1 Dehalococcoides mccartyi 99.30% 100.00% Not linked
4 ORI97016559 NZ_CP019867.1 Dehalococcoides mccartyi 99.00% 100.00% Not linked
5 ORI97016560 NZ_CP019868.1 Dehalococcoides mccartyi 99.00% 100.00% Not linked
6 ORI97016561 NZ_CP019946.1 Dehalococcoides mccartyi 99.00% 100.00% Not linked
7 ORI97016563 NZ_CP019969.1 Dehalococcoides mccartyi 99.00% 100.00% Not linked
8 ORI97289442 NZ_CM137044.1 Dehalococcoides mccartyi 99.00% 100.00% Not linked
9 ORI10010158 NC_007356.1 Dehalococcoides mccartyi CBDB1 98.70% 100.00% Not linked
10 ORI97016136 NZ_CP006951.1 Dehalococcoides mccartyi CG5 98.70% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NC_020386.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
261 1595 MSIRPAQELWEAALGEIELQ...

OriC Visualization

OriC map
OriC sequences
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaaTTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobge
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
dnaATTCCTTTAACTGCCATTTATTCCTGACATTTCCACGGTTGTTGTTTTTTCTGTAATACTTGGTTGCCCACCGGGGGTATTTACAGGTTTTTTCTATTCCTTTTCGATAGTCTTTCTATAACTTCGGTATATTTTTCGATAACCGGACTAAATTTTAGATAACTTTAAGAAATCTCTGCTTATAAAAAATGGCTTCGTGCTTTAAAATAGCGATTTTATTCGTAAAGTCTTATTATTATTATTTCTGATATACTTAAAAATAAACAAGTTAAAGTTTAAGTGATTTCGATAACCTAAGAATTAGATAACTTTTTAGATAAGGTGTTTTAGAGobgE
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI93010642 99.40% 331 2 0 1 331 1 331 0.0 601.0
ORI90010302 98.79% 331 3 1 1 331 1 330 0.0 588.0
ORI10010158 98.79% 331 3 1 1 331 1 330 0.0 588.0
ORI93010614 85.12% 242 32 4 88 327 88 327 0.0 244.0
ORI10010023 83.88% 242 34 5 88 327 84 322 0.0 226.0
Found 5 BLAST matches
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