ORI10010020 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_000195875.1`
Acc	`NC_002771.1`
OriID	ORI10010020
Organism	Mycoplasmopsis pulmonis UAB CTIP
Topology	Circular
Lineage	Bacteria ; Bacillati ; Mycoplasmatota ; - ; Mycoplasmoidales ; Metamycoplasmataceae ; Mycoplasmopsis ; Mycoplasmopsis pulmonis
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	963879 nt
Chromosome GC content	26.64%
Indicator genes	dnaA 222... 1607nt dnaN 1741... 2862nt rpmH 163226... 163372nt gidA 296872... 298707nt
OriC location	1 ... 221 nt
OriC Length	221 nt
OriC AT Content	0.8326

Comparative Sequence Support

Recurrence category Singleton

Sequence cluster BC-OH007807

Cluster members 1

Distinct accessions 1

Species / genera 1 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

No homologous origin passed the current sequence identity and reciprocal-coverage thresholds.

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
222	1607	MSKKSLDKIDLLAYNKTLQD...

OriC Visualization

OriC map

OriC sequences

-TTTTTAAATTATTACAAATAAAAGTTTTTTTGTTGTTATTTTCTCAATTTTAAAAAACTTATCCAAAAGTAAACTATGTTAATAATTTGTTTATATTTTTTGTTGATAAGTACTTAAAAGCTCAATAAAACCAAGTATTTTTTGTGGATAAATCTATCTGAATTTCACTAATTTATCAACTAAAAAATTATTTTTATCTTTTTTAACTATACTTTAAAACTdnaA

-TTTTTAAATTATTACAAATAAAAGTTTTTTTGTTGTTATTTTCTCAATTTTAAAAAACTTATCCAAAAGTAAACTATGTTAATAATTTGTTTATATTTTTTGTTGATAAGTACTTAAAAGCTCAATAAAACCAAGTATTTTTTGTGGATAAATCTATCTGAATTTCACTAATTTATCAACTAAAAAATTATTTTTATCTTTTTTAACTATACTTTAAAACTdnaa

-TTTTTAAATTATTACAAATAAAAGTTTTTTTGTTGTTATTTTCTCAATTTTAAAAAACTTATCCAAAAGTAAACTATGTTAATAATTTGTTTATATTTTTTGTTGATAAGTACTTAAAAGCTCAATAAAACCAAGTATTTTTTGTGGATAAATCTATCTGAATTTCACTAATTTATCAACTAAAAAATTATTTTTATCTTTTTTAACTATACTTTAAAACTdnaA

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

Subject ID	Identity (%)	Length	Mismatches	Gaps	Query Start	Query End	Subject Start	Subject End	E-value	Bit Score
ORI10010020	100.00%	221	0	0	1	221	1	221	0.0	409.0

Found 1 BLAST matches