Basic Information

Assembly acc GCF_000009045.1
Acc NC_000964.2
OriID ORI10010006
Organism Bacillus subtilis subsp. subtilis str. 168
Topology Circular
Lineage Bacteria ; Bacillati ; Bacillota ; Bacilli ; Caryophanales ; Bacillaceae ; Bacillus ; Bacillus subtilis
Assembly Level Complete
Literature linkage Linked
Reported experimental region 4214414...1938 nt
Source accession: NC_000964.3
Reference links
A Bacillus subtilis gene-encoding protein homologous to eukaryotic SMC motor protein is necessary for chromosome partition.
Moriya S, Tsujikawa E, Hassan AK et al. Mol Microbiol (1998)
PubMed: 9701812 DOI
Chromosome size 4214630 nt
Chromosome GC content 43.52%
Indicator genes
  • dnaA      410... 1750nt
  • dnaN      1939... 3075nt
  • hemE      1085422... 1086483nt
  • hemB      2873267... 2874241nt
  • gidA      4208627... 4210513nt
  • rpmH      4214279... 4214413nt
OriC location
  • 4214414 ... 409 nt
OriC Length
  • 626 nt
OriC AT Content
  • 0.647

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000006
Cluster members 1425
Distinct accessions 1414
Species / genera 107 / 1
Literature-linked members 2

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI96010271 NC_018520.1 Bacillus subtilis QB928 100.00% 100.00% Not linked
2 ORI97010121 NC_020507.1 Bacillus subtilis subsp. subtilis 6051-HGW 100.00% 100.00% Not linked
3 ORI97010723 NZ_AP012496.1 Bacillus subtilis BEST7003 100.00% 100.00% Not linked
4 ORI97010862 NZ_CP005997.1 Bacillus subtilis TO-A 100.00% 100.00% Not linked
5 ORI97011144 NZ_CP007800.1 Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 100.00% 100.00% Not linked
6 ORI97011151 NZ_CP008698.1 Bacillus subtilis subsp. subtilis str. AG1839 100.00% 100.00% Not linked
7 ORI97011452 NZ_CP010014.1 Bacillus sp. YP1 100.00% 100.00% Not linked
8 ORI97011459 NZ_CP010052.1 Bacillus subtilis subsp. subtilis str. 168 100.00% 100.00% Not linked
9 ORI97011461 NZ_CP010053.1 Bacillus subtilis 100.00% 100.00% Not linked
10 ORI97011496 NZ_CP010314.1 Bacillus subtilis subsp. subtilis 100.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NC_000964.2
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Replication Initiation Protein

Replication initiator protein not detected in sequence

OriC Visualization

OriC map
OriC sequences
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
rpmHTTATGACACCTCCCTCGAGGAATAGCTGTTAAAGACAGTCTTACTTATTATATTTGCGTTACCTATTCATTGTCAACTTCACTAGTGCTTTTATTTCTTGCAACCATAATAGGATACCATACCTTTTCAACTTTCGAAACCTTATTTTTTAGATTCCTTAATTTTACGGAAAAAAGACAAATTCAAACAATTTGCCCCTAAAATCACGCATGTGGATATCTTTTTCGGCTTTTTTTAGTATCCACAGAGGTTATCGACAACATTTTCACATTACCAACCCCTGTGGACAAGGTTTTTTCAACAGGTTGTCCGCTTTGTGGATAAGATTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTACTAATCCTACCTTTCCTCTTTATCCACAAAGTGTGGATAAGTTGTGGATTGATTTCACACAGCTTGTGTAGAAGGTTGTCCACAAGTTGTGAAATTTGTCGAAAAGCTATTTATCTACTATATTATATGTTTTCAACATTTAATGTGTACGAATGGTAAGCGCCATTTGCTCTTTTTTTGTGTTCTATAACAGAGAAAGACGCCATTTTCTAAGAAAAGGAGGGACGTGCCGGAAGdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI96010271 100.00% 626 0 0 1 626 1 626 0.0 1157.0
ORI10010006 100.00% 626 0 0 1 626 1 626 0.0 1157.0
ORI94010805 99.68% 626 2 0 1 626 1 626 0.0 1146.0
ORI96010027 98.72% 626 8 0 1 626 287 912 0.0 1112.0
ORI96010025 98.24% 626 11 0 1 626 287 912 0.0 1096.0
ORI96010196 97.92% 626 13 0 1 626 286 911 0.0 1085.0
ORI95010928 94.90% 628 21 8 1 626 209 827 0.0 972.0
ORI94010734 94.58% 627 25 7 1 626 1 619 0.0 961.0
ORI94010763 87.01% 631 74 8 1 625 1 629 0.0 704.0
ORI96010362 85.85% 629 77 10 1 624 1 622 0.0 658.0
ORI96010004 85.85% 629 75 12 1 624 1 620 0.0 656.0
ORI92010343 85.85% 629 75 12 1 624 1 620 0.0 656.0
ORI96010023 85.69% 629 75 12 1 624 153 771 0.0 649.0
ORI96010021 85.69% 629 75 12 1 624 153 771 0.0 649.0
ORI96010019 85.69% 629 75 12 1 624 1 619 0.0 649.0
ORI95010970 85.69% 629 75 13 1 624 290 908 0.0 649.0
ORI94010748 85.37% 629 74 12 1 624 1 616 0.0 636.0
ORI10010124 76.33% 604 109 24 2 583 2 593 0.0 292.0
ORI10010120 76.33% 604 109 24 2 583 2 593 0.0 292.0
Found 19 BLAST matches
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