DoriC

RefSeq

NZ_CP012757

DoriC accession number

pORI00000756

OriC length

585 nt

OriC AT content

0.7504

The location of oriC region

19321..19905 nt

Browse in NCBI

OriC map

OriC sequences

GATAATATCCCTCCTTTTGAATATAGTTATACGATATCACACATGTGTAAATTACACAAATGTAAATTACACATGTGTGATTTACATTTGTGTAATTTACACATGTAGTATATACTATAAGTAATAAATCAAAATTTCATTAGCAGAGAAAGTGGTTTATATGAATATAGTACCTATTGAAATGATTTCTATTACAATCATATTTGTATTGCTCATAAGTCTTGTTACAATTATTATCAATAAAAAGAATTGGTGGGGTGGTATCAAAAAAAACACTAAGTGGAAAAGATTAAATTGTAATTAAGAGATAGCGAATTAATAATGTAAATGGATTCAAAAATAAATTTTACAAATAATAACAACATGTTATTATTAATCTATAAGAAATGCAAAAAGAGCAACTACTGGAATTAGTTGCTCTCTGGTAATAGAACGTCTGCAAACGTTTATTTAATATAAAATTGATACTTGTATTATATAATGATTTTCTCTTTAGTGCAAGCACCTAGATTATTAAATAAACACAAAAAATGTAAACGTTTTATTACCTCTTACCAAACTAAAATTCGGAAAGAGGTTTTTATT

AT-rich region

The information of repeat sequences

Motif GTAAWTTACACATGT

Start	P-value		Site
62	5.12e-09	TTACACAAAT	GTAAATTACACATGT	GTGATTTACA
92	1.30e-08	TTACATTTGT	GTAATTTACACATGT	AGTATATACT
32	3.08e-07	TATAGTTATA	CGATATCACACATGT	GTAAATTACA
47	6.32e-07	TCACACATGT	GTAAATTACACAAAT	GTAAATTACA
77	7.39e-07	TTACACATGT	GTGATTTACATTTGT	GTAATTTACA

Motif GGWWWTAGTACCTCT

Start	P-value		Site
407	7.06e-08	AGCAACTACT	GGAATTAGTTGCTCT	CTGGTAATAG
424	9.45e-08	GTTGCTCTCT	GGTAATAGAACGTCT	GCAAACGTTT
538	9.85e-08	AAAATGTAAA	CGTTTTATTACCTCT	TACCAAACTA
163	6.94e-07	TGGTTTATAT	GAATATAGTACCTAT	TGAAATGATT

Motif SCWCCT

Start	P-value		Site
10	2.09e-05	GATAATATC	CCTCCT	TTTGAATATA
502	9.88e-05	TTTAGTGCAA	GCACCT	AGATTATTAA

The result of BLAST

Download

subject_id	identity	aln_length	mismatches	gaps	q_start	q_end	s_start	s_end	e_value	bit_score
pORI00000756	100.0	585	0	0	1	585	1	585	0.0	1081
pORI00000323	75.893	224	39	13	365	585	2282	2493	2.55e-22	100