RefSeq NC_010929
DoriC accession number pORI00000039
OriC length 214 nt
OriC AT content 0.5327
The location of oriC region 107591..107804 nt
Browse in NCBI
OriC map
OriC sequences
CCAAGGTTTCATCCAATTCAAAGCTTTGCTTGATTAAGATGGATTGGCTCTCACAGCAAAAGAAAAAGGCCCCCGAAACAGCGTTCCAGTAGACCTCCTCTGTAGTCTAGCAGCTAAGAGAATCGCATTTCCAGGAATCGTAGTCAAGGGACCCGTAAGGGAAAGCGTCATTTCGACGGGCGGATTTCTATTGCCTAGCAAAAGGTAAGAGGAA
CCAAGGTTTCATCCAATTCAAAGCTTTGCTTGATTAAGATGGATTGGCTCTCACAGCAAAAGAAAAAGGCCCCCGAAACAGCGTTCCAGTAGACCTCCTCTGTAGTCTAGCAGCTAAGAGAATCGCATTTCCAGGAATCGTAGTCAAGGGACCCGTAAGGGAAAGCGTCATTTCGACGGGCGGATTTCTATTGCCTAGCAAAAGGTAAGAGGAA
AT-rich region
The information of repeat sequences

Motif TTCSABKRRHBVWNNTCDATDGNCTMGCA

StartP-valueSite
1721.35e-12AAAGCGTCATTTCGACGGGCGGATTTCTATTGCCTAGCAAAAGGTAAGA
841.20e-11CGAAACAGCGTTCCAGTAGACCTCCTCTGTAGTCTAGCAGCTAAGAGAA
1292.03e-10AGAATCGCATTTCCAGGAATCGTAGTCAAGGGACCCGTAAGGGAAAGCG
257.45e-10AATTCAAAGCTTTGCTTGATTAAGATGGATTGGCTCTCACAGCAAAAGA

Motif GYKTCAT

StartP-valueSite
68.60e-05CCAAGGTTTCATCCAATTCAAA
1651.79e-04GTAAGGGAAAGCGTCATTTCGACGGGC

Motif TAAGAG

StartP-valueSite
2063.84e-04TAGCAAAAGGTAAGAGGAA
1153.84e-04GTCTAGCAGCTAAGAGAATCGCATTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000039 100.0 214 0 0 1 214 1 214 0.0 396
pORI00000035 91.549 213 18 0 2 214 2 214 0.0 294