RefSeq NC_017403.1
Accession number NC_017403.1
DoriC accession number ORI96010681
OriC length 240 nt
OriC AT content 0.804167
The location of oriC region 457768..458007 nt
Browse in NCBI
OriC map
OriC sequences
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaaACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnan
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAATATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GWWGCATC

StartP-valueSite
2336.42e-07AATATATAAGGAGGCATC
982.53e-05AAGATATTTACTTGCATCATATAGTATT
1398.71e-05CAATCAAACAGTAGCTTACTACTATTAC
98.71e-05ACTTAATTGAAGAATCAAAAATTATT

Motif CTACTA

StartP-valueSite
1564.22e-04ACTACTATTACTACTATATATCTATA
1474.22e-04CAGTAGCTTACTACTATTACTACTAT

Motif CAATTKAAC

StartP-valueSite
326.70e-06TTATTTTAAACAATTGAACCAAATAATTT
793.84e-05AAACAACCTACAATTTAACAAGATATTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96010681 100.0 240 0 0 1 240 1 240 0.0 444
ORI96010682 99.583 240 1 0 1 240 1 240 0.0 438
ORI92740167 99.583 240 1 0 1 240 1 240 0.0 438
ORI10040004 99.583 240 1 0 1 240 1 240 0.0 438