RefSeq | NC_001318.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NC_001318.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, spirochaetes, spirochaetales, spirochaetaceae, borrelia, borrelia burgdorferi group. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI10040004 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 240 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 458037..458276 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaaACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnan
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
dnaAACTTAATTGAAGAATCAAAAATTATTTTAAACAATTGAACCAAATAATTTATCAAAAATACAACAAAAAAACAACCTACAATTTAACAAGATATTTACTTGCATCATATAGTATTAAATACAATTAAACAATCAAACAGTAGCTTACTACTATTACTACTATATATCTATAAAAAATAAAAATACAAAATCCACAAAATCTTATTAAGATAAAATGTAATAGAATATATAAGGAGGCATCdnaN
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC   CtrA binding motif Fis binding site IHF binding site |
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The information of repeat sequences |
Motif GWWGCATC
Motif CTACTA
Motif CAATTKAAC
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Distribution of genes on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of nucleotide on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
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