RefSeq NC_015675.1
Accession number NC_015675.1
DoriC accession number ORI94010878
OriC length 856 nt
OriC AT content 0.462617
The location of oriC region 6884263..674 nt
Browse in NCBI
OriC map
OriC sequences
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaa
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
-CATCGCCTTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATGCCCGCAAGCAGCGTCAAGAACGGATTGCACGGTTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTGAAGGTCGACATGCTTGAAAAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTATTGATGGTCATCCACAACTTGTCCACAGCGCGTCGGAGCGACGGGAGGACAACTGGCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTCAAAATATACCACTACGCCATAGAGCACCAACCTACCGGCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGGTTCATCAAAAAGGGACGGGCCATTGGCCCTTAACCCAGCCCGAATCGGCCAGCGCAATTTGGCGGGATTTGCAACGCGGATCAAGTCCGCGAACGGGTTTGGTTTGTCTTTTTTTGATACGGTAGGGGACTGGCGTAACAAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGGCGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTTCAAGGCCGGCACCGGTCCCCCCGGTAATGGGCGACGTTCATCTGCCGGCGGCGGCAGCGGGCATCGTAGCAAAGACTTAGGTCGCCGGATCACGGATGCAGGAGGCGCATTCCCGGCGGAAAACAGGTACAAAAAGACAAGGAACTCGATCdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GAWHHHHTTCDVAHCCBTYMGADVBVGCCBKGHTTTTTC

StartP-valueSite
2935.72e-16GCTGTCAAGAGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGCCG
185.49e-15TTCCAAGGCTGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGC
1801.30e-14AAGCGTCGCCTAAAAAATTCTCACCCCTCAGAAATAGCCCTTATTTTTCAACCAGTTAT
4191.61e-14GCGCTAACCAGATTCCTTAAAAATCCGTTAGAGGTGGCCTTGCCCTATCCACAGCGATT

Motif TTTGCCGGVAHATRC

StartP-valueSite
1277.78e-09TTCAAAGTGTTTTGCCGGCACATGCATGCCCGTTG
581.04e-07GGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAA
5382.59e-07GCCAGCGCAATTTGGCGGGATTTGCAACGCGGATC
3667.00e-07TCACAATGGCTTTGTCAAAATATACCACTACGCCA
6737.50e-07GCGGTGTTGTATTGCCCTGACATACCCAACGCGGA

Motif TTWTTGAT

StartP-valueSite
5917.70e-06GGTTTGTCTTTTTTTGATACGGTAGGGG
2251.61e-05TTTCAACCAGTTATTGATGGTCATCCAC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94010878 100.0 856 0 0 1 856 1 856 0.0 1581
ORI94010798 84.543 854 109 22 7 849 6 847 0.0 824