RefSeq NC_014923.1
Accession number NC_014923.1
DoriC accession number ORI94010798
OriC length 853 nt
OriC AT content 0.466588
The location of oriC region 6263709..72 nt
Browse in NCBI
OriC map
OriC sequences
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaa
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
-CATTACTTGCCTAGACTGACGTTCTTCGAACCCGGCCGTTTGTGCCGGGTTTTTTCGTTTGCCGGCAAGCACTTAAAAAGAATGTCCGGAAACGGCGTCTTATGCGGATTTCACAATAGGGAATAGTTTGCCGGCATATGCATGCCTGCTGTTGATCGGCACGCTTGAAAATCGCCGGCCTAATGATTCTTGGCTGTCAAAAATAGCTTATATTTTTCAAACGCTTACAGATGGTGATCCACAGCTTGTCCACACCGGACTGGCCCGATCGGGGAGAAGTCGCTGTCAAGCGAATTATTTCAGAATATTTCTGTCAGCGCCCGGTTTTTCATATTCGCCGGAAAAGGGTTTGAATCACAATGGCTTTGTTAAAATGTGCCGTCGCGGCATGCCACTCGAACCCGCCTCCACTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAGTGTCGATCTATCGAAAGGGACGGGCTCTGGCTCTTAACCCAAGCCTGAATCGGCCAGCTTAAATTGGCGGGATTTGCAACGCGGATCAAGTCCGCGGACGGCTTTGGTTTGTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGACGGCGCGCCGGCGCTCTTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCACGGATAATGGGCGACGTTCACCTGCCGGCGGCGGCAGCGGACATCGTAGCAAAGACTTAGGTCGCCGGAACCGGATGCAGGAGGCGCATCCCCGGCGGAAAACAGGTACGGAAGGACAAGGAAAAGATCdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GCCGGAAHCGG

StartP-valueSite
7886.68e-07GACTTAGGTCGCCGGAACCGGATGCAGGAGG
3371.27e-06TTTCATATTCGCCGGAAAAGGGTTTGAATCA
851.82e-06AAAAAGAATGTCCGGAAACGGCGTCTTATGC
7083.51e-06GCTTCCATGGGCCGGCACCGGTTCCCACGGA
5164.38e-06CTTAACCCAAGCCTGAATCGGCCAGCTTAAA

Motif CTTAAAAAT

StartP-valueSite
4232.10e-06AACCAGATTCCTTAAAAATCCGTTAGACG
729.01e-06CCGGCAAGCACTTAAAAAGAATGTCCGGA
1641.65e-05GATCGGCACGCTTGAAAATCGCCGGCCTA
1962.15e-05ATTCTTGGCTGTCAAAAATAGCTTATATT
2245.78e-05TTTTCAAACGCTTACAGATGGTGATCCAC

Motif ATTTCASAATA

StartP-valueSite
1081.30e-07TCTTATGCGGATTTCACAATAGGGAATAGTT
2972.69e-07CAAGCGAATTATTTCAGAATATTTCTGTCAG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94010798 100.0 853 0 0 1 853 1 853 0.0 1576
ORI94010878 84.525 853 111 21 6 847 7 849 0.0 824