RefSeq NC_008595.1
Accession number NC_008595.1
DoriC accession number ORI60040082
OriC length 620 nt
OriC AT content 0.379032
The location of oriC region 1530..2149 nt
Browse in NCBI
OriC map
OriC sequences
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaaATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnan
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCAGCCCGCAATTTTTCAATCCCGGCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTGCGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCTAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAGGCCTTATTACTGTTACTGAAATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCATGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTATGGACGCGGCGACGACAACGGCTGGCCTCAGCGACTTGAAGTTTCGTTTAdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GTGCACA

StartP-valueSite
3585.70e-05GGGACGTTCGGTGCACACCCTGCGTCG
1705.70e-05CACCGCGTGCGTGCACAGCCCGCGTTC
1285.70e-05GCGCAGAGCTGTGCACAACACCGGGAG
2849.24e-05TGTCCCCAAAATGCACAGGCCTTATTA

Motif AATTTTT

StartP-valueSite
611.11e-05CCCGGCCCGGAATTTTTTCCGAGAAAC
401.11e-05CCCAGCCCGCAATTTTTCAATCCCGGC

Motif TGAAAT

StartP-valueSite
3336.35e-05GGTTCTTCTTTGAAATACAGCCCTGG
3086.35e-05TTACTGTTACTGAAATCTCTTCATCG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI60040082 100.0 620 0 0 1 620 1 620 0.0 1146
ORI10040011 97.891 569 12 0 1 569 1 569 0.0 985