RefSeq NC_002944.2
Accession number NC_002944.2
DoriC accession number ORI10040011
OriC length 569 nt
OriC AT content 0.372583
The location of oriC region 1531..2099 nt
Browse in NCBI
OriC map
OriC sequences
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaaATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnan
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCCCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTCGCGTGTCGCCGGCGCCGTGACGGGCCCCATGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif RTGCACA

StartP-valueSite
2843.32e-05TGTCCCCAAAATGCACAAGCCTTATTA
3588.77e-05GGGACGTTCGGTGCACACCCTGCGTCG
1708.77e-05CACCGCGTACGTGCACAGCCCGCGTTC
1288.77e-05GCCCAGAGCTGTGCACAACACCGGGAG
2311.30e-04CCCCACCGTGATCCACACCCCGGCGCA

Motif AATTTTTT

StartP-valueSite
612.06e-06CCCGTCCCGGAATTTTTTCCGAGAAACT
402.06e-06CCCGGCCCGCAATTTTTTCACCCCGTCC

Motif TCWWCGGTTSTTCTTYGA

StartP-valueSite
3183.32e-11TGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCC
4366.11e-11CCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10040011 100.0 569 0 0 1 569 1 569 0.0 1051
ORI60040082 97.891 569 12 0 1 569 1 569 0.0 985