RefSeq GCF_000230995.2
Accession number NC_019973.1
DoriC accession number ORI97010048
OriC length 854 nt
OriC AT content 0.447307
The location of oriC region 6200312..631 nt
Browse in NCBI
OriC map
OriC sequences
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaa
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif YTTTTTC

StartP-valueSite
2122.62e-05AATAGCTATTTTTTTTCAAGCGGTTAG
502.62e-05TCGCGCCGGGTTTTTTCGTTTGCCGGC
5875.97e-05ATGGTTTGCTCTTTTTCGATACGGTAG
3255.97e-05GCCGGCCCGGCTTTTTCATATTCGTCG
2968.82e-05GTCAAGTGAATTATTTCAGAAAATTTC

Motif WTTGCCGGVAHATRC

StartP-valueSite
1273.19e-09TGCGAAATGATTTGCCGGCACATACATGCCCGCTG
581.61e-07GGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAA
6713.85e-07ACGGTGTTGTATTGCCCTGACATACCCAACGCGGA
5366.29e-07GCCAGCTTAAATTGGCGGGATTTGCGACGTGGATC
3661.09e-06TCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCA

Motif CGNCKGAAAAG

StartP-valueSite
7873.69e-07AAGACACGGTCGCCGGAAAAGGATGCAGGAG
3379.39e-07TTTTCATATTCGTCGGAAAAGGGTTTGAATC
1762.09e-06TGAAAAGCGCCGACTGAAAAGACTACGCTCC
1623.23e-06ATGACCGGCACGCTTGAAAAGCGCCGACTGA
7541.54e-05TCATTGCCGGCGGCGGCAATGGGCATCGTAG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94010878 86.458 864 99 18 1 854 1 856 0.0 931
ORI94010798 85.03 835 107 17 22 847 22 847 0.0 833