RefSeq GCF_000219085.2
Accession number NZ_CP053749.1
DoriC accession number ORI97209076
OriC length 569 nt
OriC AT content 0.372583
The location of oriC region 1531..2099 nt
Browse in NCBI
OriC map
OriC sequences
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaaATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnan
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
dnaAATCACGCCGCGGCCCCGGCCTTTCCGGCCCCCGGCCCGCAATTTTTTCACCCCGTCCCGGAATTTTTTCCGAGAAACTTCTCACCCGTTTGTCACACCGGTCACACCCAGGGCATGTGCGCAGAGCTGTGCACAACACCGGGAGGCAGCGGTGTAGTACCACCGCGTACGTGCACAGCCCGCGTTCGTCCCCATCGGCTCAACATGTCACCCACAGCCGCCCCCACCGTGATCCACACCCCGGCGCACCGCGCGAGCTGCGGCGGGAGACCGCTGTCCCCAAAATGCACAAGCCTTATTACTGTTACTGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCCTGGGGACGTTCGGTGCACACCCTGCGTCGCGGCCGTCGTCAGCCCGGTTTGTCGGCCTTTGCGATTAGCTTTCAAGATGGCCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGCGGTCGTCGTCGACGCCTTGCGTGTCGCCGGCGCCGTGACGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCAATGGATCCGACAACGCTGAGTAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif AATTTTTT

StartP-valueSite
612.16e-06CCCGTCCCGGAATTTTTTCCGAGAAACT
402.16e-06CCCGGCCCGCAATTTTTTCACCCCGTCC

Motif GTGCACA

StartP-valueSite
3585.50e-05GGGACGTTCGGTGCACACCCTGCGTCG
1705.50e-05CACCGCGTACGTGCACAGCCCGCGTTC
1285.50e-05GCGCAGAGCTGTGCACAACACCGGGAG
2848.78e-05TGTCCCCAAAATGCACAAGCCTTATTA

Motif TCWWCGGTTSTTCTTYGA

StartP-valueSite
3183.66e-11TGAGATCTCTTCATCGGTTCTTCTTTGAAATACAGCCC
4367.52e-11CCCCAGAGGATCTACGGTTGTTCTTCGACTGCCGTTGC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10040011 99.473 569 3 0 1 569 1 569 0.0 1035
ORI60040082 98.067 569 11 0 1 569 1 569 0.0 990