RefSeq GCF_000167435.2
Accession number NZ_CP077685.1
DoriC accession number ORI97032899
OriC length 154 nt
OriC AT content 0.707792
The location of oriC region 1357..1510 nt
Browse in NCBI
OriC map
OriC sequences
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaaCATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnan
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
dnaACATGTGGAAAAGAATATCTTTTATGAAATAGTTATCCACAAGTTGTGAACAACCATTTAGTCTTGGATTCTCTCGTTTATTTAGAGTTATCCACTATATACACAAGACCTACTACTACTACTTATTATTATACTTATTAAATAAAGGAGTTCTCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif AGTTATSMAC

StartP-valueSite
851.63e-06GTTTATTTAGAGTTATCCACTATATACACA
301.63e-06TTTATGAAATAGTTATCCACAAGTTGTGAA
416.68e-06GTTATCCACAAGTTGTGAACAACCATTTAG

Motif GRRTTCTC

StartP-valueSite
1471.86e-05TTAAATAAAGGAGTTCTC
651.86e-05ATTTAGTCTTGGATTCTCTCGTTTATTT

Motif SAMAAGA

StartP-valueSite
1018.15e-05CCACTATATACACAAGACCTACTACTA
71.50e-04CATGTGGAAAAGAATATCTTTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96010171 100.0 154 0 0 1 154 1 154 0.0 285
ORI92710450 100.0 154 0 0 1 154 1 154 0.0 285
ORI90010283 100.0 154 0 0 1 154 1 154 0.0 285
ORI20010198 100.0 154 0 0 1 154 1 154 0.0 285
ORI20010196 100.0 154 0 0 1 154 1 154 0.0 285
ORI20010194 100.0 154 0 0 1 154 1 154 0.0 285
ORI10010148 100.0 154 0 0 1 154 1 154 0.0 285
ORI10010113 100.0 154 0 0 1 154 1 154 0.0 285
ORI10010069 100.0 154 0 0 1 154 1 154 0.0 285
ORI96010337 99.351 154 1 0 1 154 1 154 0.0 279
ORI10010150 99.351 154 1 0 1 154 1 154 0.0 279
ORI10010014 99.351 154 1 0 1 154 1 154 0.0 279
ORI20010200 98.701 154 2 0 1 154 1 154 0.0 274
ORI10010057 98.052 154 0 1 1 154 1 151 0.0 265