RefSeq GCF_000157895.3
Accession number NC_022663.1
DoriC accession number ORI97010620
OriC length 510 nt
OriC AT content 0.415686
The location of oriC region 3241172..3241681 nt
Browse in NCBI
OriC map
OriC sequences
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaaACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnan
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaAACCCGGTGCATTTCCGGTCGCCTTCTGCAAAAAACTTCTCTCCCGCCAGTCACAGCAGCCACACCCATCCGGTGTGGGTAGTTATGTGCACAGCCACTCGAAACTGCATTGCACACTTCGGCCTTCCCTTGCACAACTGCCGATTCATCCCCAGCAGCCCACACGGCCCACACAGTCCACCACGTCGTCATCCACATCCCGGTTCGCCGCCTAGCAGCACCGACACCGGGCCATCCCCAGAACTCACACCCCTTATTACTGTTATTGAGATCTATTCGAGGGTTGTCCTTAGAAGAACGGGTCTGGGGACACCCGGCACACAGGGTCTCTCGCGAGGGTGCGTAGCCCGACATGTCAGCGTTGACGATTAGCTTTCAACTTGGGGCCAGACGTTCTACGGTTGTTGTTCGACTGCCGTTGCGGTGTTACGTCACGGGCAGTCGCGATGCCGGCAGCGGGAGCTGGCTCACGGATCTAGGGATCGAACTCACTGTTAGGTGAAGGGACGCAdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GGTSTRGGGA

StartP-valueSite
3002.90e-06TAGAAGAACGGGTCTGGGGACACCCGGCAC
4975.46e-06CTCACTGTTAGGTGAAGGGACGCA
4725.46e-06CTGGCTCACGGATCTAGGGATCGAACTCAC
716.64e-06ACACCCATCCGGTGTGGGTAGTTATGTGCA

Motif CAKCCMCA

StartP-valueSite
1891.97e-05ACCACGTCGTCATCCACATCCCGGTTCG
564.35e-05CCAGTCACAGCAGCCACACCCATCCGGT
2328.81e-05GACACCGGGCCATCCCCAGAACTCACAC
1468.81e-05ACTGCCGATTCATCCCCAGCAGCCCACA
471.42e-04TCTCTCCCGCCAGTCACAGCAGCCACAC

Motif TGCACA

StartP-valueSite
1302.39e-04GGCCTTCCCTTGCACAACTGCCGATT
1102.39e-04GAAACTGCATTGCACACTTCGGCCTT
872.39e-04GGTAGTTATGTGCACAGCCACTCGAA
263.87e-04GGTCGCCTTCTGCAAAAAACTTCTCT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92310402 72.794 408 98 13 23 423 22 423 4.71e-30 126
ORI94040331 84.483 58 9 0 366 423 367 424 1.74e-09 58