RefSeq NZ_CP007493.1
DoriC accession number aORI10010375
OriC length 275 nt
OriC AT content 0.48
The location of oriC region 1655274..1655548 nt
Browse in NCBI
OriC map
OriC sequences
TAGAAAAATGCGCTAGAGATTTAACGTGGACAGGAGAAGGATGGGGAATGTTGTCCCTATACAAAAAATTTATTAGTGATACGAGAAATAATAAAAGGACAGCTTGCACCCCCTCGAAGCCGGGGTGGCCGAGCGGTCACACCAAAAAGTGCCACAAAAGGCGGCGGATTGCTAATCCGCTGGCGATTTCGCCTCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTGCAATATATGGGAATAGATTGAAATATCTACAAGGCTAGATTAACCAT
TAGAAAAATGCGCTAGAGATTTAACGTGGACAGGAGAAGGATGGGGAATGTTGTCCCTATACAAAAAATTTATTAGTGATACGAGAAATAATAAAAGGACAGCTTGCACCCCCTCGAAGCCGGGGTGGCCGAGCGGTCACACCAAAAAGTGCCACAAAAGGCGGCGGATTGCTAATCCGCTGGCGATTTCGCCTCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTGCAATATATGGGAATAGATTGAAATATCTACAAGGCTAGATTAACCAT
TAGAAAAATGCGCTAGAGATTTAACGTGGACAGGAGAAGGATGGGGAATGTTGTCCCTATACAAAAAATTTATTAGTGATACGAGAAATAATAAAAGGACAGCTTGCACCCCCTCGAAGCCGGGGTGGCCGAGCGGTCACACCAAAAAGTGCCACAAAAGGCGGCGGATTGCTAATCCGCTGGCGATTTCGCCTCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTGCAATATATGGGAATAGATTGAAATATCTACAAGGCTAGATTAACCAT
ORB     AT-rich region
The information of repeat sequences

Motif TCGMMKCCSGG

StartP-valueSite
2021.76e-07CCTCCCGGGTTCGAATCCCGGCCCCGGCGCC
1895.15e-07GCTGGCGATTTCGCCTCCCGGGTTCGAATCC
1142.00e-06TTGCACCCCCTCGAAGCCGGGGTGGCCGAGC

Motif AATBYRYTRGHGAT

StartP-valueSite
1745.37e-08GCGGATTGCTAATCCGCTGGCGATTTCGCCTCCC
75.37e-08TAGAAAAATGCGCTAGAGATTTAACGTGGA
674.38e-07CTATACAAAAAATTTATTAGTGATACGAGAAATA

Motif TAGATT

StartP-valueSite
2642.26e-04TCTACAAGGCTAGATTAACCAT
2422.26e-04TATATGGGAATAGATTGAAATATCTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010375 100.0 275 0 0 1 275 1 275 0.0 508
aORI10010034 100.0 33 0 0 195 227 424 456 1.59e-11 62