RefSeq NC_008698.1
DoriC accession number aORI10010034
OriC length 834 nt
OriC AT content 0.4724
The location of oriC region 538594..539427 nt
Browse in NCBI
OriC map
OriC sequences
GCAGCATCCATAGGATCCAGTAGAAGTAGAGGTTACATTAAGCAATACTTTAGAAGAGACTAAAACCCGAACGTGCTACCACAGTCTTACAGATGTACAAAGCACACGTAGAATCATACCAACTGCTAGCCGCCACGCAGAGAACAGGGGATGGTGCCCCGGCCGGGATTTGAACCCGGGATATCCGCGCCCGCCGTCGCACGGGCTCCTCGGCTCGAAAGGCCGATATCCTCTCAACCCCCTGCAGGTTGACCGGGCTAGACGACCGGGGCTACGCACCTAAAACGTCGAAGAACCAGTTATATGTTTTTCTCTTAGCACGCGAAATTTTAATATCAAGGGGTTTGTTATAGTCTAACGCGCGGCCGGGGTGGCCGAGCGGACCAAGGCGATGGCCTGGAGAGCCATTACCCGTTAAGGGTGCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTCCGATCACACTTGACGCAGATACAACTAGAAGTTGTTTTACGTTGAAAACGCCTTATTCTTGTGTGGAGGCCGCATCATCAACTTAGATGCTTCGTCTAAAAGATCATGGAAACTAGAGGCGCGCCCCCCTTTGAACCACCGTCCTCGGGGTTTCTCCCGCGAACGTTATGAGCCCCGCGGGATACCTGGCTTCCCCACCCCGCTTGTCCTCTGGTAGCGGGGGGTGGACTTTCCGGGGGCGCGCCTCACGTGAATATTTCTGCCTCTCTATATGAATTTTTCGCACGCATAAGTTCTTATTGGAAAAATTATCCAGAAAGCAGGGAAATTTATCTAACCTCTGGATAACTTTCACGATATTTTCGCTGTTACTCCCG
GCAGCATCCATAGGATCCAGTAGAAGTAGAGGTTACATTAAGCAATACTTTAGAAGAGACTAAAACCCGAACGTGCTACCACAGTCTTACAGATGTACAAAGCACACGTAGAATCATACCAACTGCTAGCCGCCACGCAGAGAACAGGGGATGGTGCCCCGGCCGGGATTTGAACCCGGGATATCCGCGCCCGCCGTCGCACGGGCTCCTCGGCTCGAAAGGCCGATATCCTCTCAACCCCCTGCAGGTTGACCGGGCTAGACGACCGGGGCTACGCACCTAAAACGTCGAAGAACCAGTTATATGTTTTTCTCTTAGCACGCGAAATTTTAATATCAAGGGGTTTGTTATAGTCTAACGCGCGGCCGGGGTGGCCGAGCGGACCAAGGCGATGGCCTGGAGAGCCATTACCCGTTAAGGGTGCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTCCGATCACACTTGACGCAGATACAACTAGAAGTTGTTTTACGTTGAAAACGCCTTATTCTTGTGTGGAGGCCGCATCATCAACTTAGATGCTTCGTCTAAAAGATCATGGAAACTAGAGGCGCGCCCCCCTTTGAACCACCGTCCTCGGGGTTTCTCCCGCGAACGTTATGAGCCCCGCGGGATACCTGGCTTCCCCACCCCGCTTGTCCTCTGGTAGCGGGGGGTGGACTTTCCGGGGGCGCGCCTCACGTGAATATTTCTGCCTCTCTATATGAATTTTTCGCACGCATAAGTTCTTATTGGAAAAATTATCCAGAAAGCAGGGAAATTTATCTAACCTCTGGATAACTTTCACGATATTTTCGCTGTTACTCCCG
GCAGCATCCATAGGATCCAGTAGAAGTAGAGGTTACATTAAGCAATACTTTAGAAGAGACTAAAACCCGAACGTGCTACCACAGTCTTACAGATGTACAAAGCACACGTAGAATCATACCAACTGCTAGCCGCCACGCAGAGAACAGGGGATGGTGCCCCGGCCGGGATTTGAACCCGGGATATCCGCGCCCGCCGTCGCACGGGCTCCTCGGCTCGAAAGGCCGATATCCTCTCAACCCCCTGCAGGTTGACCGGGCTAGACGACCGGGGCTACGCACCTAAAACGTCGAAGAACCAGTTATATGTTTTTCTCTTAGCACGCGAAATTTTAATATCAAGGGGTTTGTTATAGTCTAACGCGCGGCCGGGGTGGCCGAGCGGACCAAGGCGATGGCCTGGAGAGCCATTACCCGTTAAGGGTGCCCGGGTTCGAATCCCGGCCCCGGCGCCATTCTCCGATCACACTTGACGCAGATACAACTAGAAGTTGTTTTACGTTGAAAACGCCTTATTCTTGTGTGGAGGCCGCATCATCAACTTAGATGCTTCGTCTAAAAGATCATGGAAACTAGAGGCGCGCCCCCCTTTGAACCACCGTCCTCGGGGTTTCTCCCGCGAACGTTATGAGCCCCGCGGGATACCTGGCTTCCCCACCCCGCTTGTCCTCTGGTAGCGGGGGGTGGACTTTCCGGGGGCGCGCCTCACGTGAATATTTCTGCCTCTCTATATGAATTTTTCGCACGCATAAGTTCTTATTGGAAAAATTATCCAGAAAGCAGGGAAATTTATCTAACCTCTGGATAACTTTCACGATATTTTCGCTGTTACTCCCG
ORB     AT-rich region
The information of repeat sequences

Motif AHCHRKWAKWWGTWKWDSKYWBADHAMGCVWWAYTYTWRWRKVRA

StartP-valueSite
4806.77e-19ACGCAGATACAACTAGAAGTTGTTTTACGTTGAAAACGCCTTATTCTTGTGTGGAGGCCGCATCA
2956.77e-19ACGTCGAAGAACCAGTTATATGTTTTTCTCTTAGCACGCGAAATTTTAATATCAAGGGGTTTGTT
156.97e-18CATCCATAGGATCCAGTAGAAGTAGAGGTTACATTAAGCAATACTTTAGAAGAGACTAAAACCCG

Motif GGKHGCCCGGGBTVGAMDNBCSG

StartP-valueSite
4198.09e-11TACCCGTTAAGGGTGCCCGGGTTCGAATCCCGGCCCCGGCGCC
2471.29e-10ACCCCCTGCAGGTTGACCGGGCTAGACGACCGGGGCTACGCAC
3602.99e-09ATAGTCTAACGCGCGGCCGGGGTGGCCGAGCGGACCAAGGCGA
6706.58e-09CTTGTCCTCTGGTAGCGGGGGGTGGACTTTCCGGGGGCGCGCC
2031.40e-08GCCGTCGCACGGGCTCCTCGGCTCGAAAGGCCGATATCCTCTC

Motif TGAATWTTT

StartP-valueSite
7302.31e-06CCTCTCTATATGAATTTTTCGCACGCATA
7084.70e-06GCGCCTCACGTGAATATTTCTGCCTCTCT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010034 100.0 834 0 0 1 834 1 834 0.0 1541
aORI10010375 100.0 33 0 0 424 456 195 227 5.04e-11 62