RefSeq NC_012028.1
DoriC accession number aORI10010140
OriC length 696 nt
OriC AT content 0.4914
The location of oriC region 96763..97458 nt
Browse in NCBI
OriC map
OriC sequences
TGAATATCACACAGTGTGAGTGGGGGGAGTATAAATCTAGTGGAGAACGCCACCCCACGTTTCCGACGTTCCTTGTCCGATATCAGTGGGAAAAAGCCGTAATACGGTAGTATTGCATTTCTGATAATATAACCGCGTTTCCGACGTGAGATAGGAAACCCGTAGACGGAAGCGTCGCCTCGATGTCGAATCCCGAACCCACACACCCCACGTTTCCGTCGTAATCACTGAATAGGTGGGGTGGGGACTCGAAGAAGACGTGCACGACGAGATACCAAAGACGAGAGCCGCCTAGCCGTCCAAAGTTGGCCGTCTATAGAAGCAGCTGGAAAGGATTGTTTCATCTGAGGGGGCGAAGTACTTCGTCCCCTCCTTGGTCGAAGCACACTTAATGGACATTTCTCAGCTTTGCTACTTTAATCTATGTGTTCCAGAAGTTAGTTCACCTCTAGATTGGTTCTAGGTCAACATAATTAGTAGCTGCATAGCACTATCATAGCCTCTCCCTACGCCGTCGTGGAGAAACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGTGGGGTGGGTGTCCTCCATCATCGAATT
TGAATATCACACAGTGTGAGTGGGGGGAGTATAAATCTAGTGGAGAACGCCACCCCACGTTTCCGACGTTCCTTGTCCGATATCAGTGGGAAAAAGCCGTAATACGGTAGTATTGCATTTCTGATAATATAACCGCGTTTCCGACGTGAGATAGGAAACCCGTAGACGGAAGCGTCGCCTCGATGTCGAATCCCGAACCCACACACCCCACGTTTCCGTCGTAATCACTGAATAGGTGGGGTGGGGACTCGAAGAAGACGTGCACGACGAGATACCAAAGACGAGAGCCGCCTAGCCGTCCAAAGTTGGCCGTCTATAGAAGCAGCTGGAAAGGATTGTTTCATCTGAGGGGGCGAAGTACTTCGTCCCCTCCTTGGTCGAAGCACACTTAATGGACATTTCTCAGCTTTGCTACTTTAATCTATGTGTTCCAGAAGTTAGTTCACCTCTAGATTGGTTCTAGGTCAACATAATTAGTAGCTGCATAGCACTATCATAGCCTCTCCCTACGCCGTCGTGGAGAAACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGTGGGGTGGGTGTCCTCCATCATCGAATT
TGAATATCACACAGTGTGAGTGGGGGGAGTATAAATCTAGTGGAGAACGCCACCCCACGTTTCCGACGTTCCTTGTCCGATATCAGTGGGAAAAAGCCGTAATACGGTAGTATTGCATTTCTGATAATATAACCGCGTTTCCGACGTGAGATAGGAAACCCGTAGACGGAAGCGTCGCCTCGATGTCGAATCCCGAACCCACACACCCCACGTTTCCGTCGTAATCACTGAATAGGTGGGGTGGGGACTCGAAGAAGACGTGCACGACGAGATACCAAAGACGAGAGCCGCCTAGCCGTCCAAAGTTGGCCGTCTATAGAAGCAGCTGGAAAGGATTGTTTCATCTGAGGGGGCGAAGTACTTCGTCCCCTCCTTGGTCGAAGCACACTTAATGGACATTTCTCAGCTTTGCTACTTTAATCTATGTGTTCCAGAAGTTAGTTCACCTCTAGATTGGTTCTAGGTCAACATAATTAGTAGCTGCATAGCACTATCATAGCCTCTCCCTACGCCGTCGTGGAGAAACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGTGGGGTGGGTGTCCTCCATCATCGAATT
ORB     AT-rich region
The information of repeat sequences

Motif CACHCCCTHCACCBWCVTSBAGTWACGACGGAAACGBGGGGGGKGTGAYC

StartP-valueSite
5671.56e-29AAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAA
6331.04e-25AAAACAGTGTCACCCCCTTCACCCACATCCAGTTACGACGGAAACGTGGGGTGGGTGTCCTCCATCATCG
5019.08e-23CTATCATAGCCTCTCCCTACGCCGTCGTGGAGAAACGACGGAAACGCGGGGGGTGTGATCCAATCGAAAA
2009.55e-19ATCCCGAACCCACACACCCCACGTTTCCGTCGTAATCACTGAATAGGTGGGGTGGGGACTCGAAGAAGAC

Motif GTTYCMGAMGTKMSWT

StartP-valueSite
591.79e-09GCCACCCCACGTTTCCGACGTTCCTTGTCCGATATC
1375.01e-09ATATAACCGCGTTTCCGACGTGAGATAGGAAACCCG
4289.48e-09TAATCTATGTGTTCCAGAAGTTAGTTCACCTCTAGA

Motif AATMKMAMACAGTGT

StartP-valueSite
6181.11e-09GGTGTGATCCAATCGAAAACAGTGTCACCCCCTTC
5521.11e-09GGTGTGATCCAATCGAAAACAGTGTCACCCCCTTC
31.67e-08TGAATATCACACAGTGTGAGTGGGGGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010140 100.0 696 0 0 1 696 1 696 0.0 1286
aORI10010140 93.269 104 3 3 591 694 525 624 8.68e-38 150
aORI10010140 93.269 104 3 3 525 624 591 694 8.68e-38 150
aORI10010320 98.567 628 5 3 1 624 1 628 0.0 1107
aORI10010320 100.0 106 0 0 591 696 525 630 0.0 196