RefSeq NC_010999.1
Accession number NC_010999.1
DoriC accession number ORI92510434
OriC length 172 nt
OriC AT content 0.645349
The location of oriC region 1431..1602 nt
Browse in NCBI
OriC map
OriC sequences
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaaTGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnan
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
dnaATGCACATGTGGATAACCTTCAAAAACAAGCCATTTTATCCGTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTGTTTCTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATTACTTCAAAAGCTTTATATTATATATATAAAAGACGTTCAGGAGGCTCTTdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TSCACADKTKSAWMACBYYC

StartP-valueSite
13.61e-11.TGCACATGTGGATAACCTTCAAAAACAAGC
512.65e-10GTCGCACTTATCCACAAGTGCATAACTTTCTCAGTTGTTG
941.47e-09CTCAAAGTTTTCCACAGTTTGAACACGCCCTATTACTATT

Motif ARGASG

StartP-valueSite
1623.10e-05AAAGACGTTCAGGAGGCTCTT
1532.62e-04ATATATATAAAAGACGTTCAGGAGGC

Motif AMAAGC

StartP-valueSite
251.83e-04ACCTTCAAAAACAAGCCATTTTATCC
1294.31e-04CTATTACTTCAAAAGCTTTATATTAT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92510434 100.0 172 0 0 1 172 1 172 0.0 318
ORI94010712 99.419 172 1 0 1 172 1 172 0.0 313
ORI40010229 99.419 172 1 0 1 172 1 172 0.0 313
ORI96010308 98.837 172 0 1 1 172 1 170 0.0 305
ORI96010110 98.837 172 0 1 1 172 1 170 0.0 305
ORI96010108 98.837 172 0 1 1 172 1 170 0.0 305
ORI96010120 84.795 171 25 1 3 172 3 173 6.72623e-44 171
ORI94010702 84.795 171 25 1 3 172 3 173 6.72623e-44 171
ORI96010115 84.211 171 26 1 3 172 3 173 3.12069e-42 165
ORI93010585 84.211 171 26 1 3 172 3 173 3.12069e-42 165