RefSeq NC_003134
DoriC accession number pORI00000346
OriC length 301 nt
OriC AT content 0.6179
The location of oriC region 70162..70462 nt
Browse in NCBI
OriC map
OriC sequences
AGTTTCCCCTGAGATAGATTCCCTGCCCATATATTGCCTATAAAGTTCAATCACATTGTACATACACACAAAAAATGTACAACATATTTTGTATTGTCATTAAATTATTGTACGTATCCAACCATCATTCACATCAAACCGCGCAGTTAGACATCGTTTCTGAGCAGGCGAGGGGGTGGAGGGTATGGTGGTAACAAGTAATCACTACACAGCTAGGACATTCAGGTCATTCTGTCCAGAAATTGTTGCAACAAGACCAAATATAGACTATATTTAAACCTCTTTGTTATGTGAGGTTGTT
AGTTTCCCCTGAGATAGATTCCCTGCCCATATATTGCCTATAAAGTTCAATCACATTGTACATACACACAAAAAATGTACAACATATTTTGTATTGTCATTAAATTATTGTACGTATCCAACCATCATTCACATCAAACCGCGCAGTTAGACATCGTTTCTGAGCAGGCGAGGGGGTGGAGGGTATGGTGGTAACAAGTAATCACTACACAGCTAGGACATTCAGGTCATTCTGTCCAGAAATTGTTGCAACAAGACCAAATATAGACTATATTTAAACCTCTTTGTTATGTGAGGTTGTT
AT-rich region
The information of repeat sequences

Motif GKSGAGGG

StartP-valueSite
1674.69e-06TTTCTGAGCAGGCGAGGGGGTGGAGGGT
1768.39e-06AGGCGAGGGGGTGGAGGGTATGGTGGTA

Motif YTSYCCWKADATWG

StartP-valueSite
2325.65e-08TCAGGTCATTCTGTCCAGAAATTGTTGCAACAAG
236.97e-08GATAGATTCCCTGCCCATATATTGCCTATAAAGT
43.80e-07AGTTTCCCCTGAGATAGATTCCCTGCC

Motif CRCAGYTAG

StartP-valueSite
1423.75e-06CATCAAACCGCGCAGTTAGACATCGTTTC
2086.31e-06GTAATCACTACACAGCTAGGACATTCAGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000346 100.0 301 0 0 1 301 1 301 0.0 556