RefSeq NC_003134
DoriC accession number pORI00000344
OriC length 744 nt
OriC AT content 0.5511
The location of oriC region 45743..46486 nt
Browse in NCBI
OriC map
OriC sequences
AATTCTTATTCAAATAGTTTTGTCCGGGGCAACGATAACTGACAAGGCGCACCGATGTTTGCAAATGCCTGTTTTACTTATACCCATTATTCACAGGACCGATCCAATAATTAGATCCCCAGAGAGATCCTACAGAAGATCAAAAGAGATCCCCGATCGTCTCCAGCCGTTGCGGTTACTGGCCTGAGAGGGGGTTACTATCCACTATGGGGAGCAAAGTAACCTCTGTAGAGAGCATAATAACCGCTATGAAGAGCAAAACAACCTCTCTGGAGAGTGGTCGGTATCCACTGTAGTGAGTAGGAGGCATTGTCTTGACTGGATAACTCTTTGCCTGTTTTTCTGTGTTAGATAGCTGATATTCATGGATATATCGTTAATCTTGCGTTCAGGCGTGTTTGTTTCCACCACACATTATCCCCAGAAAGGGAGTGATGGCTGGTTTTGCAATTACCTGATTTTTATACACAGGCCCGATCCAGTAATTCAGATCCCAAATAGAACCAAAGAGACCCACAAAGACCCAAAAAGATCCCCGCATCCCGCAAACCGTTGTGCCATCTGGCCTCAGAGGTGATCGATATCCACTATAGAGAGAAGATCAGCCACTATGAAGAGTAAACCAACCACTGTAGAGAGTAGAAAAACCACTATAGGCGGTAGGATAACCGCTGTGATGAGTGCTAATATCCACTGTAATCAGCAAAGGCCACCAAAGCCGTCGAATAAAAAGAGACACTTGGA
AATTCTTATTCAAATAGTTTTGTCCGGGGCAACGATAACTGACAAGGCGCACCGATGTTTGCAAATGCCTGTTTTACTTATACCCATTATTCACAGGACCGATCCAATAATTAGATCCCCAGAGAGATCCTACAGAAGATCAAAAGAGATCCCCGATCGTCTCCAGCCGTTGCGGTTACTGGCCTGAGAGGGGGTTACTATCCACTATGGGGAGCAAAGTAACCTCTGTAGAGAGCATAATAACCGCTATGAAGAGCAAAACAACCTCTCTGGAGAGTGGTCGGTATCCACTGTAGTGAGTAGGAGGCATTGTCTTGACTGGATAACTCTTTGCCTGTTTTTCTGTGTTAGATAGCTGATATTCATGGATATATCGTTAATCTTGCGTTCAGGCGTGTTTGTTTCCACCACACATTATCCCCAGAAAGGGAGTGATGGCTGGTTTTGCAATTACCTGATTTTTATACACAGGCCCGATCCAGTAATTCAGATCCCAAATAGAACCAAAGAGACCCACAAAGACCCAAAAAGATCCCCGCATCCCGCAAACCGTTGTGCCATCTGGCCTCAGAGGTGATCGATATCCACTATAGAGAGAAGATCAGCCACTATGAAGAGTAAACCAACCACTGTAGAGAGTAGAAAAACCACTATAGGCGGTAGGATAACCGCTGTGATGAGTGCTAATATCCACTGTAATCAGCAAAGGCCACCAAAGCCGTCGAATAAAAAGAGACACTTGGA
AT-rich region
The information of repeat sequences

Motif RRGDGNWHRVTAWCCACTRTRGAGAGHARAANAACCWCTVT

StartP-valueSite
1896.68e-18CTGGCCTGAGAGGGGGTTACTATCCACTATGGGGAGCAAAGTAACCTCTGTAGAGAGCATA
5721.37e-17CTGGCCTCAGAGGTGATCGATATCCACTATAGAGAGAAGATCAGCCACTATGAAGAGTAAA
2316.35e-17AACCTCTGTAGAGAGCATAATAACCGCTATGAAGAGCAAAACAACCTCTCTGGAGAGTGGT
6141.07e-16AGCCACTATGAAGAGTAAACCAACCACTGTAGAGAGTAGAAAAACCACTATAGGCGGTAGG
2751.49e-15CCTCTCTGGAGAGTGGTCGGTATCCACTGTAGTGAGTAGGAGGCATTGTCTTGACTGGATA

Motif CMAAAGAGAYCC

StartP-valueSite
5041.71e-07CCAAATAGAACCAAAGAGACCCACAAAGACCC
1412.89e-07TACAGAAGATCAAAAGAGATCCCCGATCGTCT
1194.63e-07AATTAGATCCCCAGAGAGATCCTACAGAAGAT
5248.81e-07CCACAAAGACCCAAAAAGATCCCCGCATCCCG
7285.66e-06GCCGTCGAATAAAAAGAGACACTTGGA

Motif TRSCTGDTTTT

StartP-valueSite
3321.36e-07GATAACTCTTTGCCTGTTTTTCTGTGTTAGA
4521.14e-06GTTTTGCAATTACCTGATTTTTATACACAGG
4361.26e-06AAGGGAGTGATGGCTGGTTTTGCAATTACCT
662.18e-06TGTTTGCAAATGCCTGTTTTACTTATACCCA
3536.60e-06CTGTGTTAGATAGCTGATATTCATGGATATA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000344 100.0 744 0 0 1 744 1 744 0.0 1375