RefSeq NC_002632
DoriC accession number pORI00000225
OriC length 1465 nt
OriC AT content 0.5986
The location of oriC region 1421..2885 nt
Browse in NCBI
OriC map
OriC sequences
GACTAGTCCTCCCTTCGCATTACAACGAAAAAAAGAATACGGAAACTTAGAACAGCATGAGTATGTGGATTGGTTTTTGTCATTTGCTAAAGTGGTTAATAAGAAACTAAAACCGGATGGAAGTTTTGTTGTAGATTTTGGTGGGGCGTACATGAAAGGCGTTCCAGCAAGAAGTATCTATAACTTTAGAGTTTTGATCAGAATGATAGACGAAGTGGGTTTTTTTCTTGCTGAAGATTTTTATTGGTTTAACCCATCAAAATTACCAAGCCCTATAGAATGGGTTAATAAGAGAAAAATAAGAGTTAAAGATGCAGTGAATACAGTATGGTGGTTCTCTAAAACAGAGTGGCCTAAGTCTGATATAACGAAAGTTCTAGCTCCATATAGCGATAGAATGAAAAAGTTAATTGAAGACCCAGACAAATTCTATACACCAAAAACTAGACCATCTGGGCATGATATAGGGAAGTCGTTCTCTAAAGACAATGGAGGTTCAATTCCTCCTAATTTATTACAAATATCAAACTCAGAATCAAATGGTCAATATTTAGCCAATTGTAAGTTGATGGGTATTAAAGCGCATCCCGCTAGATTCCCTGCTAAGTTACCCGAGTTTTTTATTAGAATGTTAACTGAGCCAGATGATCTTGTTGTTGATATTTTTGGCGGCTCTAATACTACTGGTCTAGTCGCAGAAAGAGAATCTCGTAAATGGATCTCGTTTGAGATGAAACCTGAATATGTTGCGGCATCGGCGTTTCGTTTTTTAGACAATAATATAAGTGAAGAAAAAATAACTGATATTTATAATCGAATCCTTAATGGTGAGTCTTTGGATTTAAACTCTATTATCTAAATTTTAACTCGACCTTTTTGATAAAAAAGTAGTTCCCTGTAGGGCTTAGATCAGGTAGTCTTAGATATGTAAAAAAAAAAACCGCCTCAGCAAAGGCGTTTTCTTAAAGATTGGTTCGTAGAGCAGCAACTCTTTGAACCGAGGTAACAGGTCTGAACACCGCTGAAACCAAATTCTGTTCTATCGAGTTTAGCCGTAATGACGGTGACACTTCAAGGAATTTCAGCAAACAATTCTGCACTCTTGTTACCAATGCTATGCCAGTGCGTTTTTACGTGTCTGTCAGGGTTGGTCANGGATTCAAGAGAACAGTTCACCTGAACAGCGTGATAGTCGGGTAAACGGGAGTCGTGCAAATAGCCCAGCTTGAGCGGAACCACCTAAGCAAGCGCAGTACCGGTACAGGAAGCTGAGACATAGCGCCCCCAAAGCAGAAAGAGCGATTAAAAGCCGGCTGTAAACCTTGTAAGGTGGGAACAGAGAGCGCCACCAGGAGCCGTCAGAGGAAACTTCTGCATCTTTATAGTCCTGTGCAGGTTTCGCCCTATCTTGACTAGAGCACCGAAAATCAGTCGATTTTTGTGAAGGCTCGTCAGGAGGCGGAGC
GACTAGTCCTCCCTTCGCATTACAACGAAAAAAAGAATACGGAAACTTAGAACAGCATGAGTATGTGGATTGGTTTTTGTCATTTGCTAAAGTGGTTAATAAGAAACTAAAACCGGATGGAAGTTTTGTTGTAGATTTTGGTGGGGCGTACATGAAAGGCGTTCCAGCAAGAAGTATCTATAACTTTAGAGTTTTGATCAGAATGATAGACGAAGTGGGTTTTTTTCTTGCTGAAGATTTTTATTGGTTTAACCCATCAAAATTACCAAGCCCTATAGAATGGGTTAATAAGAGAAAAATAAGAGTTAAAGATGCAGTGAATACAGTATGGTGGTTCTCTAAAACAGAGTGGCCTAAGTCTGATATAACGAAAGTTCTAGCTCCATATAGCGATAGAATGAAAAAGTTAATTGAAGACCCAGACAAATTCTATACACCAAAAACTAGACCATCTGGGCATGATATAGGGAAGTCGTTCTCTAAAGACAATGGAGGTTCAATTCCTCCTAATTTATTACAAATATCAAACTCAGAATCAAATGGTCAATATTTAGCCAATTGTAAGTTGATGGGTATTAAAGCGCATCCCGCTAGATTCCCTGCTAAGTTACCCGAGTTTTTTATTAGAATGTTAACTGAGCCAGATGATCTTGTTGTTGATATTTTTGGCGGCTCTAATACTACTGGTCTAGTCGCAGAAAGAGAATCTCGTAAATGGATCTCGTTTGAGATGAAACCTGAATATGTTGCGGCATCGGCGTTTCGTTTTTTAGACAATAATATAAGTGAAGAAAAAATAACTGATATTTATAATCGAATCCTTAATGGTGAGTCTTTGGATTTAAACTCTATTATCTAAATTTTAACTCGACCTTTTTGATAAAAAAGTAGTTCCCTGTAGGGCTTAGATCAGGTAGTCTTAGATATGTAAAAAAAAAAACCGCCTCAGCAAAGGCGTTTTCTTAAAGATTGGTTCGTAGAGCAGCAACTCTTTGAACCGAGGTAACAGGTCTGAACACCGCTGAAACCAAATTCTGTTCTATCGAGTTTAGCCGTAATGACGGTGACACTTCAAGGAATTTCAGCAAACAATTCTGCACTCTTGTTACCAATGCTATGCCAGTGCGTTTTTACGTGTCTGTCAGGGTTGGTCANGGATTCAAGAGAACAGTTCACCTGAACAGCGTGATAGTCGGGTAAACGGGAGTCGTGCAAATAGCCCAGCTTGAGCGGAACCACCTAAGCAAGCGCAGTACCGGTACAGGAAGCTGAGACATAGCGCCCCCAAAGCAGAAAGAGCGATTAAAAGCCGGCTGTAAACCTTGTAAGGTGGGAACAGAGAGCGCCACCAGGAGCCGTCAGAGGAAACTTCTGCATCTTTATAGTCCTGTGCAGGTTTCGCCCTATCTTGACTAGAGCACCGAAAATCAGTCGATTTTTGTGAAGGCTCGTCAGGAGGCGGAGC

AT-rich region
The information of repeat sequences

Motif YAGNAAAGKCGTTCYCTNAAR

StartP-valueSite
4658.14e-11GGGCATGATATAGGGAAGTCGTTCTCTAAAGACAATGGAGG
9471.48e-09AAAACCGCCTCAGCAAAGGCGTTTTCTTAAAGATTGGTTCG
1513.98e-09GTGGGGCGTACATGAAAGGCGTTCCAGCAAGAAGTATCTAT
3247.94e-09GCAGTGAATACAGTATGGTGGTTCTCTAAAACAGAGTGGCC
8812.05e-08ACCTTTTTGATAAAAAAGTAGTTCCCTGTAGGGCTTAGATC

Motif AGCGCMHCC

StartP-valueSite
13428.93e-07GGGAACAGAGAGCGCCACCAGGAGCCGTC
12781.39e-06GCTGAGACATAGCGCCCCCAAAGCAGAAA
5806.08e-06TGGGTATTAAAGCGCATCCCGCTAGATTC
12299.82e-06GCCCAGCTTGAGCGGAACCACCTAAGCAA

Motif YTTGYTGWWGATWTTKDTKGS

StartP-valueSite
1253.53e-11GGATGGAAGTTTTGTTGTAGATTTTGGTGGGGCGTACATGA
6507.84e-11GCCAGATGATCTTGTTGTTGATATTTTTGGCGGCTCTAATA
2271.04e-10GGGTTTTTTTCTTGCTGAAGATTTTTATTGGTTTAACCCAT

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000225 100.0 1465 0 0 1 1465 1 1465 0.0 2702