RefSeq NC_002575
DoriC accession number pORI00000132
OriC length 166 nt
OriC AT content 0.5241
The location of oriC region 162337..162502 nt
Browse in NCBI
OriC map
OriC sequences
ATAAGGATAGGAACAGCAAAAGAAAGGCCCCCAAACGTCGCCGTCGTGGAAGCCTCTCTCAATGGTCTAAGCAGCCTGAGAATCGCATTTCCATGAATCGCAGTCAAGAGTCTTTGGCACCGTTTTTGGTGAGCAGATTTCTTTTGCCTATTGAAGGGTGAAAGAC
ATAAGGATAGGAACAGCAAAAGAAAGGCCCCCAAACGTCGCCGTCGTGGAAGCCTCTCTCAATGGTCTAAGCAGCCTGAGAATCGCATTTCCATGAATCGCAGTCAAGAGTCTTTGGCACCGTTTTTGGTGAGCAGATTTCTTTTGCCTATTGAAGGGTGAAAGAC
AT-rich region
The information of repeat sequences

Motif TCGCMKTY

StartP-valueSite
981.18e-05TTTCCATGAATCGCAGTCAAGAGTCTTT
382.11e-05CCCCCAAACGTCGCCGTCGTGGAAGCCT
837.61e-05AGCCTGAGAATCGCATTTCCATGAATCG

Motif TYTTTKGY

StartP-valueSite
1111.08e-05CAGTCAAGAGTCTTTGGCACCGTTTTTG
1402.12e-05TGAGCAGATTTCTTTTGCCTATTGAAGG
1237.92e-05TTTGGCACCGTTTTTGGTGAGCAGATTT

Motif CYCYCA

StartP-valueSite
281.59e-04AAAAGAAAGGCCCCCAAACGTCGCCG
566.85e-04GTGGAAGCCTCTCTCAATGGTCTAAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000132 100.0 166 0 0 1 166 1 166 0.0 307