RefSeq NC_002522
DoriC accession number pORI00000254
OriC length 442 nt
OriC AT content 0.4231
The location of oriC region 3592..4033 nt
Browse in NCBI
OriC map
OriC sequences
GGTGAAAACTCCTTCAATTAGTAATAGGTAACTCCTGTTACCTGTTACTATGTTACCTCATTTCAACGTCACCGGCAAACACGACTGGCAACATCTGAACGCCCCGACTCAGCCACCCGCAGACCGTGAGCTAACGCCCACGGTCTGCGCATAAACGAGTAGCGCTGGTCTCGTGGTTGGGTTATCTGGTGGGGCGACCGTTTCTGCGTGCCAGCCGGTGTGCTGCCCTGCGTGTGGCAACGTCGCACACGGGGCAGAGAGGTTCCAGTGTGGCCGGAGTGAGGGACCGCTGTAGCGTCCCAGCAACCGCCGTAGCGGACCTCGCTTCGCTCGGACAGAAAGGCGCTTCTGCCAGAACCATCTGATATTGCTCTTCAGACCAAGTTTGAACACACCGCGTGAAGTCCAACGCTGAACGGCACTCATGTGTGAGTGTGGGGGC
GGTGAAAACTCCTTCAATTAGTAATAGGTAACTCCTGTTACCTGTTACTATGTTACCTCATTTCAACGTCACCGGCAAACACGACTGGCAACATCTGAACGCCCCGACTCAGCCACCCGCAGACCGTGAGCTAACGCCCACGGTCTGCGCATAAACGAGTAGCGCTGGTCTCGTGGTTGGGTTATCTGGTGGGGCGACCGTTTCTGCGTGCCAGCCGGTGTGCTGCCCTGCGTGTGGCAACGTCGCACACGGGGCAGAGAGGTTCCAGTGTGGCCGGAGTGAGGGACCGCTGTAGCGTCCCAGCAACCGCCGTAGCGGACCTCGCTTCGCTCGGACAGAAAGGCGCTTCTGCCAGAACCATCTGATATTGCTCTTCAGACCAAGTTTGAACACACCGCGTGAAGTCCAACGCTGAACGGCACTCATGTGTGAGTGTGGGGGC
AT-rich region
The information of repeat sequences

Motif WGDCCAMVTYTGAACGBCMC

StartP-valueSite
861.38e-09CAAACACGACTGGCAACATCTGAACGCCCCGACTCAGCCA
3771.91e-09ATTGCTCTTCAGACCAAGTTTGAACACACCGCGTGAAGTC
534.91e-09TGTTACTATGTTACCTCATTTCAACGTCACCGGCAAACAC
4037.64e-09CACCGCGTGAAGTCCAACGCTGAACGGCACTCATGTGTGA

Motif AGTGWGG

StartP-valueSite
4326.49e-05CTCATGTGTGAGTGTGGGGGC
2676.49e-05GAGAGGTTCCAGTGTGGCCGGAGTGAG
2781.29e-04GTGTGGCCGGAGTGAGGGACCGCTGTA
2312.83e-04TGCTGCCCTGCGTGTGGCAACGTCGCA
2563.46e-04CACACGGGGCAGAGAGGTTCCAGTGTG

Motif AACTCCT

StartP-valueSite
304.88e-05AGTAATAGGTAACTCCTGTTACCTGTT
74.88e-05GGTGAAAACTCCTTCAATTAGTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000254 100.0 442 0 0 1 442 1 442 0.0 817