RefSeq NC_002094
DoriC accession number pORI00000153
OriC length 305 nt
OriC AT content 0.6426
The location of oriC region 1778..2082 nt
Browse in NCBI
OriC map
OriC sequences
TTTTACCTCTTTGGATTTTGACATAAAAAAAGGAACTCTATTTAGAGTTCCTTTTTTGGTTTTTAGAAACGATTGAGCGAAGCGAAAATCAGTTTCTACTTATCTTGATAATAAGGGTAACTATTTACGGCGAGAGGTGAGTCTCAAATCCGTTGAGCGAGTAGGCGTAAAACAGAAAAAACTTGCATTTTCATACCTAGTGTTTTAGACTTTTAAGTACCACCTTAAAGCCAAAAATTAGGAAGAAGTGCAAGTTTTTGCTGTTCTTCCTGAGGTCGTTCGCCTCAGAAAGGAATTTCATTTGT
TTTTACCTCTTTGGATTTTGACATAAAAAAAGGAACTCTATTTAGAGTTCCTTTTTTGGTTTTTAGAAACGATTGAGCGAAGCGAAAATCAGTTTCTACTTATCTTGATAATAAGGGTAACTATTTACGGCGAGAGGTGAGTCTCAAATCCGTTGAGCGAGTAGGCGTAAAACAGAAAAAACTTGCATTTTCATACCTAGTGTTTTAGACTTTTAAGTACCACCTTAAAGCCAAAAATTAGGAAGAAGTGCAAGTTTTTGCTGTTCTTCCTGAGGTCGTTCGCCTCAGAAAGGAATTTCATTTGT
AT-rich region
The information of repeat sequences

Motif CSDTWRAGCSA

StartP-valueSite
1506.89e-08AGTCTCAAATCCGTTGAGCGAGTAGGCGTAA
701.15e-06TTTTTAGAAACGATTGAGCGAAGCGAAAATC
2234.49e-06TTAAGTACCACCTTAAAGCCAAAAATTAGGA

Motif GCGWAAAWCAG

StartP-valueSite
1655.21e-07GAGCGAGTAGGCGTAAAACAGAAAAAACTTG
825.21e-07ATTGAGCGAAGCGAAAATCAGTTTCTACTTA

Motif CCTSAG

StartP-valueSite
2838.28e-05AGGTCGTTCGCCTCAGAAAGGAATTT
2691.87e-04TGCTGTTCTTCCTGAGGTCGTTCGCC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000153 100.0 305 0 0 1 305 1 305 0.0 564