RefSeq NC_001755
DoriC accession number pORI00000259
OriC length 1935 nt
OriC AT content 0.4434
The location of oriC region 1084..83 nt
Browse in NCBI
OriC map
OriC sequences
GCCAAAAGAAGCCGATCAGCAGTTAAGCACCTGTTTTCTATTCGCTTAGCTTAATATCCGTTATTGGGTGTGTTGATAAGTCCGTGGAAAAACAGCCATTTGAGAAAGTTTTCCACGAATATTTGGTACAGGACCGCAAATTCTTGTTTTTATTCGGCATGACTGAGTTTTCCACGAATATTTGGTACAGGACGGGTACGAATATCTGGTACAGGATCTTGTAGTAAGGGATCTTGTAGGGATCTTGTAGTAGGCGCGCCCCTCGTTGTGGAAAACTCTCAGCCGCTTTCGGCATGCCCCTTGCTTCGCCGCCTTCGAGTTTGCGCCTTCGGCGCTGAACCACGGGGCAGCACGCGCAACTTTTCCCACCAGCTCGCGCGATAGGTTCGCGATCGGCGCCCTCAAAACCGCCCATTTCGGCCCTTACAGGCCGATTTCGAAGTTTACAACTTTACACAACGCACACCCCAACTTTACAGGAATTGCGGCCGATAACCCCTTGGTTTTCAGACGCATACCATCCGCAACCACCCCATACCCCCCGAATAATTTCTGGCAAAATAATGGGGCAAATCATAGCATGAATTTCATGGCATATAAGGCAAGGATAGTGTTGCCAATAACGGAAGCAAATTCGCCACGAAATTCACGCCACAACCTTGCCCCACTATTCAGCTCAAACACGGCATGTCGTGCTGCGAAGCCGATGGCCACAACGCGGCCACCAGCGTGTCGGCATAGAAGCGGGCCACCACGCCCAGCCGCCTGTCCTCCAGCTCCACCGCAAAGCGGCCCATCGGGCCATCCTCTACGGCCCCGACCAGAATCCGACCGTGTACGTCGCTCTTCGGAACGATCTTCATGGCTCGAACAGGGCTGATTTTCTACTTGCGATAACTCCCATTATCACCGATAACGGCTCAGAAGCCCTCTAACAGGCGATCTCCAGAACGGCCGACCAAGGACACGGGCCAGCCAGCGATCGCCCGCCTACGGGCCTCTGATGCGCCCTGAGACCAGCAGCCCACAGAACCACGGATGGGGGGCAAGGCGACGGACCAGCGCCACCAACAGCAAGGCCAGCAAGCCCTGAGAGGCGATCTGAGCGACGATCTCGGGCTGGAGCATATCGGCGGCCTCCTGAACGGCCTGCGCGCGTCTGAGAGACTCTGACGGCCTCTGACGCAGGAAGGCCGTTACCGCCCGCGAATAGCCCACACGTCGGCGACAAGGCGCGTGCAATGCATTGGCCAGCAGCACGTAAAACACCGTGCTCCGCACATGCTCAGCCGTCTTCACCAGCGTTTGCCGACCAACAGGCCGCGGCCGCTGGCCTCGAGGCAACACCATCACCACGTGCCGATGCAAGCCCTGCTCGCCCCAGCCCCAGCCCCAGAAGTACAGCTCCACGCCCCGAACCAGGCGGGCATGCTGACGGGCAATTTCCTCGCGCGATCCGAGCAACACAATATGCCACACAACACCATCCTCAAAACTCAAAAACCACGACGCAAGACGTGCAGCAATCGCTACAAACTTAGAAGCACGACGGGAAAGAAATATGTCCGTTGCAGAATTACTAAAATGATCTACTCTCGGACGCCTTGATCGCCGTCTGAAACTTGCCGATGTGGATTCCGTTGTGTACATTGCAACCGCCGTCCAGGTTGTCCTGCTCTAAGCCCCCGCCTCGCCCGCTGGGGTTTTTGTTTTTGGCTCATTTTCGGCATTTTCGACGATCAACCACACACGACGCCCCACACGCACCGCGGGCAACAGGCCGCGCCGAATGCGCCGCCGAACCGTTGTCTCCGCGATACCATATTTGCGCGCAAATTCCTGTACAGTTAGAAAGCTTTTACCGCTGCTGTCTATCATGATAGATCACAATATTTGTGCTGATATTGTCGCTAAAGACAACGCACAAATTTGAGC
GCCAAAAGAAGCCGATCAGCAGTTAAGCACCTGTTTTCTATTCGCTTAGCTTAATATCCGTTATTGGGTGTGTTGATAAGTCCGTGGAAAAACAGCCATTTGAGAAAGTTTTCCACGAATATTTGGTACAGGACCGCAAATTCTTGTTTTTATTCGGCATGACTGAGTTTTCCACGAATATTTGGTACAGGACGGGTACGAATATCTGGTACAGGATCTTGTAGTAAGGGATCTTGTAGGGATCTTGTAGTAGGCGCGCCCCTCGTTGTGGAAAACTCTCAGCCGCTTTCGGCATGCCCCTTGCTTCGCCGCCTTCGAGTTTGCGCCTTCGGCGCTGAACCACGGGGCAGCACGCGCAACTTTTCCCACCAGCTCGCGCGATAGGTTCGCGATCGGCGCCCTCAAAACCGCCCATTTCGGCCCTTACAGGCCGATTTCGAAGTTTACAACTTTACACAACGCACACCCCAACTTTACAGGAATTGCGGCCGATAACCCCTTGGTTTTCAGACGCATACCATCCGCAACCACCCCATACCCCCCGAATAATTTCTGGCAAAATAATGGGGCAAATCATAGCATGAATTTCATGGCATATAAGGCAAGGATAGTGTTGCCAATAACGGAAGCAAATTCGCCACGAAATTCACGCCACAACCTTGCCCCACTATTCAGCTCAAACACGGCATGTCGTGCTGCGAAGCCGATGGCCACAACGCGGCCACCAGCGTGTCGGCATAGAAGCGGGCCACCACGCCCAGCCGCCTGTCCTCCAGCTCCACCGCAAAGCGGCCCATCGGGCCATCCTCTACGGCCCCGACCAGAATCCGACCGTGTACGTCGCTCTTCGGAACGATCTTCATGGCTCGAACAGGGCTGATTTTCTACTTGCGATAACTCCCATTATCACCGATAACGGCTCAGAAGCCCTCTAACAGGCGATCTCCAGAACGGCCGACCAAGGACACGGGCCAGCCAGCGATCGCCCGCCTACGGGCCTCTGATGCGCCCTGAGACCAGCAGCCCACAGAACCACGGATGGGGGGCAAGGCGACGGACCAGCGCCACCAACAGCAAGGCCAGCAAGCCCTGAGAGGCGATCTGAGCGACGATCTCGGGCTGGAGCATATCGGCGGCCTCCTGAACGGCCTGCGCGCGTCTGAGAGACTCTGACGGCCTCTGACGCAGGAAGGCCGTTACCGCCCGCGAATAGCCCACACGTCGGCGACAAGGCGCGTGCAATGCATTGGCCAGCAGCACGTAAAACACCGTGCTCCGCACATGCTCAGCCGTCTTCACCAGCGTTTGCCGACCAACAGGCCGCGGCCGCTGGCCTCGAGGCAACACCATCACCACGTGCCGATGCAAGCCCTGCTCGCCCCAGCCCCAGCCCCAGAAGTACAGCTCCACGCCCCGAACCAGGCGGGCATGCTGACGGGCAATTTCCTCGCGCGATCCGAGCAACACAATATGCCACACAACACCATCCTCAAAACTCAAAAACCACGACGCAAGACGTGCAGCAATCGCTACAAACTTAGAAGCACGACGGGAAAGAAATATGTCCGTTGCAGAATTACTAAAATGATCTACTCTCGGACGCCTTGATCGCCGTCTGAAACTTGCCGATGTGGATTCCGTTGTGTACATTGCAACCGCCGTCCAGGTTGTCCTGCTCTAAGCCCCCGCCTCGCCCGCTGGGGTTTTTGTTTTTGGCTCATTTTCGGCATTTTCGACGATCAACCACACACGACGCCCCACACGCACCGCGGGCAACAGGCCGCGCCGAATGCGCCGCCGAACCGTTGTCTCCGCGATACCATATTTGCGCGCAAATTCCTGTACAGTTAGAAAGCTTTTACCGCTGCTGTCTATCATGATAGATCACAATATTTGTGCTGATATTGTCGCTAAAGACAACGCACAAATTTGAGC
AT-rich region
The information of repeat sequences

Motif ACGAATATYTGGTACAGGA

StartP-valueSite
1741.30e-12TGAGTTTTCCACGAATATTTGGTACAGGACGGGTACGAA
1151.30e-12AAAGTTTTCCACGAATATTTGGTACAGGACCGCAAATTC
1983.33e-12CAGGACGGGTACGAATATCTGGTACAGGATCTTGTAGTA

Motif TGBTKTYTWTBNKBWTRGCTBANTWT

StartP-valueSite
321.02e-12GTTAAGCACCTGTTTTCTATTCGCTTAGCTTAATATCCGTTATTGG
16995.97e-12CCTCGCCCGCTGGGGTTTTTGTTTTTGGCTCATTTTCGGCATTTTC
1451.31e-11CGCAAATTCTTGTTTTTATTCGGCATGACTGAGTTTTCCACGAATA
18666.08e-11CTTTTACCGCTGCTGTCTATCATGATAGATCACAATATTTGTGCTG

Motif GGATMTTGTHG

StartP-valueSite
2401.81e-07GATCTTGTAGGGATCTTGTAGTAGGCGCGCC
2291.81e-07TTGTAGTAAGGGATCTTGTAGGGATCTTGTA
6061.14e-06TATAAGGCAAGGATAGTGTTGCCAATAACGG
19001.22e-06ATATTTGTGCTGATATTGTCGCTAAAGACAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000259 100.0 1935 0 0 1 1935 1 1935 0.0 3574
pORI00000259 100.0 28 0 0 166 193 107 134 2.45e-07 53
pORI00000259 100.0 28 0 0 107 134 166 193 2.45e-07 53