RefSeq NC_007516.1
Accession number NC_007516.1
DoriC accession number ORI10030080
OriC length 432 nt
OriC AT content 0.49537
The location of oriC region 2510458..230 nt
Browse in NCBI
OriC map
OriC sequences
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnan
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
-CACCGCCCTCGATCAACGCGCTTCAAACCCCCAGATAAGCTTTTCTATAGCCAAAAGACCAAACCAACCAACAAAGCGGCTGCGGAAGACGGCCTAAAACCATCGCAACACGCTGTGGAAAAAGACAAAAAGAATCCACTCGCTCGCCCCAAAAGTTTTCCACCCGCTGTGAAGAAGTGGAAAACACGGTCTTACTCCCCATCCTGTGAAAAATTCTCCTCAGCCTTGGTTCGTCGAGAGTTGTTGTGAAAACTGGATTTTGAGTGGCTTTCCCCCTTTTCCCCAGGCCCTACGACGGCTGTTTTTCTCTTTTATTTTTTAAATCCATAAGAACCAAACAGCCGAACAGAGGCTTCCAAGGCGTTGGCCATTGCACTTCCCCTCAGCCTGTGAAACCGTGGGACACCTCAGCGCGCTCAGGTCTTCAGGACGdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif SCTGTGAAAAMDK

StartP-valueSite
2038.86e-08TACTCCCCATCCTGTGAAAAATTCTCCTCAGCC
1661.39e-07TTTTCCACCCGCTGTGAAGAAGTGGAAAACACG
2435.48e-07GTCGAGAGTTGTTGTGAAAACTGGATTTTGAGT
1127.23e-07ATCGCAACACGCTGTGGAAAAAGACAAAAAGAA
3871.11e-06TTCCCCTCAGCCTGTGAAACCGTGGGACACCTC

Motif AGHGGCTK

StartP-valueSite
2637.71e-06CTGGATTTTGAGTGGCTTTCCCCCTTTT
3481.70e-05ACAGCCGAACAGAGGCTTCCAAGGCGTT
755.20e-05CAACCAACAAAGCGGCTGCGGAAGACGG

Motif GCSTTGG

StartP-valueSite
3612.55e-05GGCTTCCAAGGCGTTGGCCATTGCACT
2236.38e-05ATTCTCCTCAGCCTTGGTTCGTCGAGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10030080 100.0 432 0 0 1 432 1 432 0.0 798