RefSeq NZ_CP020361.1
DoriC accession number aORI10010349
OriC length 431 nt
OriC AT content 0.2854
The location of oriC region 2270006..100 nt
Browse in NCBI
OriC map
OriC sequences
TTAGAGTATATTTCTTTTGTTTCATCTTATTTTTTTCCCTAACCTTAAAATACACACAGTATATTTCAATTGATTTCAGTGAAACACGAAATCTACACCAGCTTTTCCCTCTTCATCTATATACAAAACTTTAATTTGCGTATATATTTGAAGTTCGATGGAAACGGGTGAAATTCACACTCTGTGTCTCTGATAATTATACAATACGATAAGTTGGTATTATATACTCGATTTTTTACATACAAAAAATATAGTGTAACATGAAATTATTACATCTGTGAGAAAATAGGGAACTTTATCACTAGAAACAAAAGAAATATACTGCAAAACCGGGGAGTTAAATGACTGTAATCCCTATTTCAAAATAGTTTGAGGTAACACCATTGGAAATTATTGTAAACTAAAATAACGTATGAAACATATGTATTCAT
TTAGAGTATATTTCTTTTGTTTCATCTTATTTTTTTCCCTAACCTTAAAATACACACAGTATATTTCAATTGATTTCAGTGAAACACGAAATCTACACCAGCTTTTCCCTCTTCATCTATATACAAAACTTTAATTTGCGTATATATTTGAAGTTCGATGGAAACGGGTGAAATTCACACTCTGTGTCTCTGATAATTATACAATACGATAAGTTGGTATTATATACTCGATTTTTTACATACAAAAAATATAGTGTAACATGAAATTATTACATCTGTGAGAAAATAGGGAACTTTATCACTAGAAACAAAAGAAATATACTGCAAAACCGGGGAGTTAAATGACTGTAATCCCTATTTCAAAATAGTTTGAGGTAACACCATTGGAAATTATTGTAAACTAAAATAACGTATGAAACATATGTATTCAT
TTAGAGTATATTTCTTTTGTTTCATCTTATTTTTTTCCCTAACCTTAAAATACACACAGTATATTTCAATTGATTTCAGTGAAACACGAAATCTACACCAGCTTTTCCCTCTTCATCTATATACAAAACTTTAATTTGCGTATATATTTGAAGTTCGATGGAAACGGGTGAAATTCACACTCTGTGTCTCTGATAATTATACAATACGATAAGTTGGTATTATATACTCGATTTTTTACATACAAAAAATATAGTGTAACATGAAATTATTACATCTGTGAGAAAATAGGGAACTTTATCACTAGAAACAAAAGAAATATACTGCAAAACCGGGGAGTTAAATGACTGTAATCCCTATTTCAAAATAGTTTGAGGTAACACCATTGGAAATTATTGTAAACTAAAATAACGTATGAAACATATGTATTCAT
ORB     AT-rich region
The information of repeat sequences

Motif CSGGKG

StartP-valueSite
3301.38e-05TACTGCAAAACCGGGGAGTTAAATGA
1653.06e-05TCGATGGAAACGGGTGAAATTCACAC

Motif TCTGTG

StartP-valueSite
2751.14e-04AATTATTACATCTGTGAGAAAATAGG
1811.14e-04AAATTCACACTCTGTGTCTCTGATAA
1873.66e-04ACACTCTGTGTCTCTGATAATTATAC
763.66e-04TCAATTGATTTCAGTGAAACACGAAA

Motif GTTYGAKG

StartP-valueSite
3686.91e-06TTTCAAAATAGTTTGAGGTAACACCATT
1531.24e-05TATATTTGAAGTTCGATGGAAACGGGTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010358 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010355 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010352 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010349 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010346 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010197 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010194 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010022 100.0 431 0 0 1 431 1 431 0.0 797
aORI10010266 93.735 431 27 0 1 431 1 431 0.0 647