RefSeq NC_020247.1
DoriC accession number aORI10010198
OriC length 160 nt
OriC AT content 0.7312
The location of oriC region 1197378..1197537 nt
Browse in NCBI
OriC map
OriC sequences
ACAGTAAAATAGATTACTACTACAACTACTAAAAGTATTTTGGTGGATGGTATAAAAACTATTTCCAGAGTTTGTATAAAGTTTGAAGCTTATTAGCATAAAATAACGTTGTTTAAACTTGAGTTGTAGTAGAAGATATTATGATAGGAAAATGAGTGTT
ACAGTAAAATAGATTACTACTACAACTACTAAAAGTATTTTGGTGGATGGTATAAAAACTATTTCCAGAGTTTGTATAAAGTTTGAAGCTTATTAGCATAAAATAACGTTGTTTAAACTTGAGTTGTAGTAGAAGATATTATGATAGGAAAATGAGTGTT
ACAGTAAAATAGATTACTACTACAACTACTAAAAGTATTTTGGTGGATGGTATAAAAACTATTTCCAGAGTTTGTATAAAGTTTGAAGCTTATTAGCATAAAATAACGTTGTTTAAACTTGAGTTGTAGTAGAAGATATTATGATAGGAAAATGAGTGTT
ORB     AT-rich region
The information of repeat sequences

Motif ACTAYTWM

StartP-valueSite
164.10e-06AAAATAGATTACTACTACAACTACTAAA
254.26e-05TACTACTACAACTACTAAAAGTATTTTG
585.71e-05TGGTATAAAAACTATTTCCAGAGTTTGT

Motif MGTTGT

StartP-valueSite
1071.21e-04CATAAAATAACGTTGTTTAAACTTGA
1226.65e-04TTTAAACTTGAGTTGTAGTAGAAGAT

Motif GKTKGAWGS

StartP-valueSite
421.10e-05AAAGTATTTTGGTGGATGGTATAAAAACT
811.97e-05TTTGTATAAAGTTTGAAGCTTATTAGCAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010198 100.0 160 0 0 1 160 1 160 0.0 296
aORI10010195 100.0 160 0 0 1 160 1 160 0.0 296
aORI10010023 100.0 160 0 0 1 160 34 193 0.0 296
aORI10010265 95.625 160 7 0 1 160 34 193 0.0 257