RefSeq NC_017459.1
DoriC accession number aORI10010119
OriC length 822 nt
OriC AT content 0.5608
The location of oriC region 2389841..2390662 nt
Browse in NCBI
OriC map
OriC sequences
TCACATAAAGGTAACCGACCCTCAATGTGATAGGTCAATCCCTATTCACGTTTTAATACGACTGAGAGTACAATTCTGTATGTATATAAATTCTAGAAACTGAAGGGACCCATTCACACTGAGGGGGGGTCAAATCAGGAACCCCATTCACACTGAGGTGTGCTGGATGGCGATTAACAAAACAGAGCTTTTAGTTTAGAGAATATCATTGATATTCGATCTTATGAAGTACATTGTTGGTGGCGAGCAGTCGGGCGATTTTTTGTATTTCTCTACGGCACCTGAGCTTCCCAGAACGGGAGTGAGACAGCGTGAAAGAACCGATCTACCGAATTTACTCAGTTCGGAGAGTCATCACCAACAATCTGCTTCACAAGAGCGTTGATATTAGTCTCGGAACTTCTCACCGAGGAGATTTCGCTCGACGGGATCGCCGTCATTGCGAACGAGACGCATTCGTTCGAAATGATATCTGTGAGAACCGGGAGTTTGAGCTTCTGGAAAACACGCCCACCCCACTGGTTCCGCTGTTAGCAGATTGAAATGGGCGTACAACTAGACAGAAACTGTATCCTGATTATTACTGACGATAGTAATGATGTAGTCGGAATAATCTGTCCTAACATGAGTTCAGTACTTCCAACATACCCCACTGGTTCCGCTGTTACTGAAAAATAATTAATCAGCCAATAGAATCAACCGAGTATGTCTGACAACTGAGCAGTTACAAACGATAGTGTGATTAACAGTGGAAGTGGTGGGGTGGGTGTGTTCAACGATTAGACAGCAAAGACATCTGATATGTCGGTTCAGTTTATATGC
TCACATAAAGGTAACCGACCCTCAATGTGATAGGTCAATCCCTATTCACGTTTTAATACGACTGAGAGTACAATTCTGTATGTATATAAATTCTAGAAACTGAAGGGACCCATTCACACTGAGGGGGGGTCAAATCAGGAACCCCATTCACACTGAGGTGTGCTGGATGGCGATTAACAAAACAGAGCTTTTAGTTTAGAGAATATCATTGATATTCGATCTTATGAAGTACATTGTTGGTGGCGAGCAGTCGGGCGATTTTTTGTATTTCTCTACGGCACCTGAGCTTCCCAGAACGGGAGTGAGACAGCGTGAAAGAACCGATCTACCGAATTTACTCAGTTCGGAGAGTCATCACCAACAATCTGCTTCACAAGAGCGTTGATATTAGTCTCGGAACTTCTCACCGAGGAGATTTCGCTCGACGGGATCGCCGTCATTGCGAACGAGACGCATTCGTTCGAAATGATATCTGTGAGAACCGGGAGTTTGAGCTTCTGGAAAACACGCCCACCCCACTGGTTCCGCTGTTAGCAGATTGAAATGGGCGTACAACTAGACAGAAACTGTATCCTGATTATTACTGACGATAGTAATGATGTAGTCGGAATAATCTGTCCTAACATGAGTTCAGTACTTCCAACATACCCCACTGGTTCCGCTGTTACTGAAAAATAATTAATCAGCCAATAGAATCAACCGAGTATGTCTGACAACTGAGCAGTTACAAACGATAGTGTGATTAACAGTGGAAGTGGTGGGGTGGGTGTGTTCAACGATTAGACAGCAAAGACATCTGATATGTCGGTTCAGTTTATATGC
TCACATAAAGGTAACCGACCCTCAATGTGATAGGTCAATCCCTATTCACGTTTTAATACGACTGAGAGTACAATTCTGTATGTATATAAATTCTAGAAACTGAAGGGACCCATTCACACTGAGGGGGGGTCAAATCAGGAACCCCATTCACACTGAGGTGTGCTGGATGGCGATTAACAAAACAGAGCTTTTAGTTTAGAGAATATCATTGATATTCGATCTTATGAAGTACATTGTTGGTGGCGAGCAGTCGGGCGATTTTTTGTATTTCTCTACGGCACCTGAGCTTCCCAGAACGGGAGTGAGACAGCGTGAAAGAACCGATCTACCGAATTTACTCAGTTCGGAGAGTCATCACCAACAATCTGCTTCACAAGAGCGTTGATATTAGTCTCGGAACTTCTCACCGAGGAGATTTCGCTCGACGGGATCGCCGTCATTGCGAACGAGACGCATTCGTTCGAAATGATATCTGTGAGAACCGGGAGTTTGAGCTTCTGGAAAACACGCCCACCCCACTGGTTCCGCTGTTAGCAGATTGAAATGGGCGTACAACTAGACAGAAACTGTATCCTGATTATTACTGACGATAGTAATGATGTAGTCGGAATAATCTGTCCTAACATGAGTTCAGTACTTCCAACATACCCCACTGGTTCCGCTGTTACTGAAAAATAATTAATCAGCCAATAGAATCAACCGAGTATGTCTGACAACTGAGCAGTTACAAACGATAGTGTGATTAACAGTGGAAGTGGTGGGGTGGGTGTGTTCAACGATTAGACAGCAAAGACATCTGATATGTCGGTTCAGTTTATATGC
ORB     AT-rich region
The information of repeat sequences

Motif CCCCAYTVDYWCYGMBGTKAG

StartP-valueSite
5144.24e-11AACACGCCCACCCCACTGGTTCCGCTGTTAGCAGATTGAAA
1421.85e-10AAATCAGGAACCCCATTCACACTGAGGTGTGCTGGATGGCG
6484.75e-10TTCCAACATACCCCACTGGTTCCGCTGTTACTGAAAAATAA
1084.52e-09AACTGAAGGGACCCATTCACACTGAGGGGGGGTCAAATCAG
5732.02e-08GAAACTGTATCCTGATTATTACTGACGATAGTAATGATGTA

Motif THHGAMAHCWGAGCTKTBAVDAHCGRGAGTDTGA

StartP-valueSite
7099.42e-15ACCGAGTATGTCTGACAACTGAGCAGTTACAAACGATAGTGTGATTAACAGTGG
2745.77e-14TGTATTTCTCTACGGCACCTGAGCTTCCCAGAACGGGAGTGAGACAGCGTGAAA
4602.92e-13GACGCATTCGTTCGAAATGATATCTGTGAGAACCGGGAGTTTGAGCTTCTGGAA
1752.54e-12GGATGGCGATTAACAAAACAGAGCTTTTAGTTTAGAGAATATCATTGATATTCG

Motif CSSTCRWYGBGAWMG

StartP-valueSite
191.82e-08AGGTAACCGACCCTCAATGTGATAGGTCAATCCCT
4194.73e-08GAGGAGATTTCGCTCGACGGGATCGCCGTCATTGC
4347.36e-08GACGGGATCGCCGTCATTGCGAACGAGACGCATTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010119 100.0 822 0 0 1 822 1 822 0.0 1519
aORI10010132 97.57 823 19 1 1 822 1 823 0.0 1408