RefSeq NC_012029.1
DoriC accession number aORI10010146
OriC length 278 nt
OriC AT content 0.4317
The location of oriC region 1078447..1078724 nt
Browse in NCBI
OriC map
OriC sequences
TCAGTTTCCAAACGGAAGAACAGACGAAATGAGGGGTGTCGATGCCTCAGAGAGGACCCTCTAGCTGAATAAGAACAGACGAAATGAGGGGTGTGATTCAAGCGAGAAGGACCCACCACGGACTCCAGCGACGAGAACAGACGAAACGAGGGGTGTCCGGACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAACGCTGTCGAGCTATCGCACTCTCGAGCCTGACCGAAACCCCGACAAACCGCG
TCAGTTTCCAAACGGAAGAACAGACGAAATGAGGGGTGTCGATGCCTCAGAGAGGACCCTCTAGCTGAATAAGAACAGACGAAATGAGGGGTGTGATTCAAGCGAGAAGGACCCACCACGGACTCCAGCGACGAGAACAGACGAAACGAGGGGTGTCCGGACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAACGCTGTCGAGCTATCGCACTCTCGAGCCTGACCGAAACCCCGACAAACCGCG
TCAGTTTCCAAACGGAAGAACAGACGAAATGAGGGGTGTCGATGCCTCAGAGAGGACCCTCTAGCTGAATAAGAACAGACGAAATGAGGGGTGTGATTCAAGCGAGAAGGACCCACCACGGACTCCAGCGACGAGAACAGACGAAACGAGGGGTGTCCGGACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAAACTCCACGAGCCGACCGTCAAACGCTGTCGAGCTATCGCACTCTCGAGCCTGACCGAAACCCCGACAAACCGCG
ORB     AT-rich region
The information of repeat sequences

Motif AGAACAGACGAAAYGAGGGGTGT

StartP-valueSite
723.32e-14TAGCTGAATAAGAACAGACGAAATGAGGGGTGTGATTCAAGCG
173.32e-14TCCAAACGGAAGAACAGACGAAATGAGGGGTGTCGATGCCTCA
1341.13e-13TCCAGCGACGAGAACAGACGAAACGAGGGGTGTCCGGACTCCA

Motif ACTCCACGAGCCGACCGTCAA

StartP-valueSite
2051.32e-12GACCGTCAAAACTCCACGAGCCGACCGTCAAACGCTGTCGA
1831.32e-12GACCGTCAAAACTCCACGAGCCGACCGTCAAAACTCCACGA
1611.32e-12GGGTGTCCGGACTCCACGAGCCGACCGTCAAAACTCCACGA

Motif CTVTCG

StartP-valueSite
2299.95e-05CCGTCAAACGCTGTCGAGCTATCGCA
2452.09e-04AGCTATCGCACTCTCGAGCCTGACCG
2373.23e-04CGCTGTCGAGCTATCGCACTCTCGAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010146 100.0 278 0 0 1 278 1 278 0.0 514