RefSeq NC_012028.1
DoriC accession number aORI10010142
OriC length 618 nt
OriC AT content 0.5146
The location of oriC region 257141..257758 nt
Browse in NCBI
OriC map
OriC sequences
TCACATCCGTTGGCGGCAAGTGATCCGCTACCACGGAGAATGACCCCTCCCTCCCCCCGTCATCGATGTGTAAACTCTTCAGAAGAGGGGAGGGGGTGGAATGTGAGAATAGTCAAAACAGCTAGAAACGCCGGAATACGTCTTGAAACGTGTTTAGACATCCAAATAAGGTCTAAATTGGGTTAGTCCTTTGTCTGACGAAGATTTATATGACCTCCATTATAACCATAGCCGTAATGTACCATTACACGAGGTTTTGAGAAGGTTACTTCAATAAACCGAGTAATGGTATAGCCGCTGATCAGCGCTGTCGTTCTCCCCGATATCACCGTTATTAGACTCTAAACCAGCTGTCAACGGTTTCACCCGCACTTTCGCCCACCCCGACTCTCACATGTTTACACTTCGATGACGGGGGGTGGGTGTTCAATACTCGGGACAAACGCAGGTGATACTCGTGGTCTGGGTGGAGAAATGGGCACTCTCAACTCCTGCGCGAAATCCGAACTTGTCGAATGCGAGAGCCGAGTCACGCTCCTATGAGATCTGATTCGAGTTTACACATCGAATACGGGGGGTGTCTCTCGAGAGAATCTTCTGAATCTATCTGCAAATTCA
TCACATCCGTTGGCGGCAAGTGATCCGCTACCACGGAGAATGACCCCTCCCTCCCCCCGTCATCGATGTGTAAACTCTTCAGAAGAGGGGAGGGGGTGGAATGTGAGAATAGTCAAAACAGCTAGAAACGCCGGAATACGTCTTGAAACGTGTTTAGACATCCAAATAAGGTCTAAATTGGGTTAGTCCTTTGTCTGACGAAGATTTATATGACCTCCATTATAACCATAGCCGTAATGTACCATTACACGAGGTTTTGAGAAGGTTACTTCAATAAACCGAGTAATGGTATAGCCGCTGATCAGCGCTGTCGTTCTCCCCGATATCACCGTTATTAGACTCTAAACCAGCTGTCAACGGTTTCACCCGCACTTTCGCCCACCCCGACTCTCACATGTTTACACTTCGATGACGGGGGGTGGGTGTTCAATACTCGGGACAAACGCAGGTGATACTCGTGGTCTGGGTGGAGAAATGGGCACTCTCAACTCCTGCGCGAAATCCGAACTTGTCGAATGCGAGAGCCGAGTCACGCTCCTATGAGATCTGATTCGAGTTTACACATCGAATACGGGGGGTGTCTCTCGAGAGAATCTTCTGAATCTATCTGCAAATTCA
TCACATCCGTTGGCGGCAAGTGATCCGCTACCACGGAGAATGACCCCTCCCTCCCCCCGTCATCGATGTGTAAACTCTTCAGAAGAGGGGAGGGGGTGGAATGTGAGAATAGTCAAAACAGCTAGAAACGCCGGAATACGTCTTGAAACGTGTTTAGACATCCAAATAAGGTCTAAATTGGGTTAGTCCTTTGTCTGACGAAGATTTATATGACCTCCATTATAACCATAGCCGTAATGTACCATTACACGAGGTTTTGAGAAGGTTACTTCAATAAACCGAGTAATGGTATAGCCGCTGATCAGCGCTGTCGTTCTCCCCGATATCACCGTTATTAGACTCTAAACCAGCTGTCAACGGTTTCACCCGCACTTTCGCCCACCCCGACTCTCACATGTTTACACTTCGATGACGGGGGGTGGGTGTTCAATACTCGGGACAAACGCAGGTGATACTCGTGGTCTGGGTGGAGAAATGGGCACTCTCAACTCCTGCGCGAAATCCGAACTTGTCGAATGCGAGAGCCGAGTCACGCTCCTATGAGATCTGATTCGAGTTTACACATCGAATACGGGGGGTGTCTCTCGAGAGAATCTTCTGAATCTATCTGCAAATTCA
ORB     AT-rich region
The information of repeat sequences

Motif TGTDWACWCDTCGAADRCGGGGGGBGDGT

StartP-valueSite
3962.59e-15GACTCTCACATGTTTACACTTCGATGACGGGGGGTGGGTGTTCAATACT
5551.35e-13ATCTGATTCGAGTTTACACATCGAATACGGGGGGTGTCTCTCGAGAGAA
694.21e-12GTCATCGATGTGTAAACTCTTCAGAAGAGGGGAGGGGGTGGAATGTGAG
5022.44e-11CTGCGCGAAATCCGAACTTGTCGAATGCGAGAGCCGAGTCACGCTCCTA

Motif GCVCTBTCVHYCHCCCCG

StartP-valueSite
3691.08e-09GGTTTCACCCGCACTTTCGCCCACCCCGACTCTCACAT
3059.09e-09CCGCTGATCAGCGCTGTCGTTCTCCCCGATATCACCGT
422.88e-08CACGGAGAATGACCCCTCCCTCCCCCCGTCATCGATGT
4798.54e-08GGAGAAATGGGCACTCTCAACTCCTGCGCGAAATCCGA

Motif GSKASAAACGCMGG

StartP-valueSite
4363.75e-08TTCAATACTCGGGACAAACGCAGGTGATACTCGT
1213.75e-08AGTCAAAACAGCTAGAAACGCCGGAATACGTCTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010142 100.0 618 0 0 1 618 1 618 0.0 1142