RefSeq NC_012028.1
DoriC accession number aORI10010139
OriC length 1219 nt
OriC AT content 0.4873
The location of oriC region 1555..2773 nt
Browse in NCBI
OriC map
OriC sequences
GCGGAGCTCTATCAGTATAACACTTGCAGGGTGGTGTGTCGTCTAGAACACTTGCAGCTTGGTGTGGTGTTGAAAACACTTGCAGGGTGGTGTGGTCAAATACGCCGCGTACAATATTCTTTCACGTGGACTTGATCAAGTAGGAGTGATTCACTCCCATTCAATGCCTACGGAGACTGCGCTCTCTACGGGAACCGATTCGGTTCCTACAAAGCGCGTCTTGGAAACAGGAAGCCCCGTCCTCTGTGAGGCCGTAAGGTCGATCGGGGTGAGGTAGTTCACTTAGTGTAGGTTCAAGTTTTGTCTTATGAGTGATGGGCTTTCTATGTCTCTCGATTTGAGCTAGCAGGTCGATGCTTAGAGCTACACGTAAAACACCCCTCTATCGATGTGTAAACTTCCAGCTGAGCCTATCTATCGTCAGGACGCGATATATTCTCGTACAGACCATCTTCTCGGGCTTGTCAGAGATGGTCTCGTAGATCTGCTGGAGCGTCTCCTCAACGGTGAACAGGTTGTGCTTTCGAGGAACTCGTGGCTTTACTCAGTGAGACCGTAGAACTTCTAAGAGAGCCCTGTCGACGTATCCGACAGCGCCCGCTTTTTTTGGTGTTGTTTCCGGACTCTTCGAGTCGACCTCGAAACAGGCGAGTGGAGTCGGTTCGAAGCGTAGCCACTCATCCCTTTTTGTCGACTAACAGCACAGCGACTAAACGCAACTGCTCCATAATTGACCGCACCGATACTACTGAGCCAATATTAGTATTCGCTGGCTCTGCTGAAATCCTATTCTTCAGCTATATTCTCGCCTGAAACAGCCAGCTGATTAGGACTTCGAACACAACAAAGACAATCATTAATTGAAATTACAAGTAGCAGCGTGTTATTATATCATTTATCGAACGGCTATACATATACACCGGCACGTTCGCCGTAATTGGGGCTTCACTGGGAGGGCCAGCAACACGCTCGCTCATTGCCGGAGACCACAGCATCCCAATACTGCTTATGGCGATTGGCGGAGCTGGAATGATCAGTACCTCACAAAGCATCCTCGGCTAGCTGTTTCTGCGGCCTGAGTTCTGTGTCGAAGCGGTTGTACTGACGGTCTCGACGAGAGAATTACGGACGGATCGACGGAGAGCTGTCGCTGTCGGCGGCGGTCAGCCGCCGACGCGACAGCGTCGCCACTCACTCCGCTGGCTTGCTCGGTCGGTGG
GCGGAGCTCTATCAGTATAACACTTGCAGGGTGGTGTGTCGTCTAGAACACTTGCAGCTTGGTGTGGTGTTGAAAACACTTGCAGGGTGGTGTGGTCAAATACGCCGCGTACAATATTCTTTCACGTGGACTTGATCAAGTAGGAGTGATTCACTCCCATTCAATGCCTACGGAGACTGCGCTCTCTACGGGAACCGATTCGGTTCCTACAAAGCGCGTCTTGGAAACAGGAAGCCCCGTCCTCTGTGAGGCCGTAAGGTCGATCGGGGTGAGGTAGTTCACTTAGTGTAGGTTCAAGTTTTGTCTTATGAGTGATGGGCTTTCTATGTCTCTCGATTTGAGCTAGCAGGTCGATGCTTAGAGCTACACGTAAAACACCCCTCTATCGATGTGTAAACTTCCAGCTGAGCCTATCTATCGTCAGGACGCGATATATTCTCGTACAGACCATCTTCTCGGGCTTGTCAGAGATGGTCTCGTAGATCTGCTGGAGCGTCTCCTCAACGGTGAACAGGTTGTGCTTTCGAGGAACTCGTGGCTTTACTCAGTGAGACCGTAGAACTTCTAAGAGAGCCCTGTCGACGTATCCGACAGCGCCCGCTTTTTTTGGTGTTGTTTCCGGACTCTTCGAGTCGACCTCGAAACAGGCGAGTGGAGTCGGTTCGAAGCGTAGCCACTCATCCCTTTTTGTCGACTAACAGCACAGCGACTAAACGCAACTGCTCCATAATTGACCGCACCGATACTACTGAGCCAATATTAGTATTCGCTGGCTCTGCTGAAATCCTATTCTTCAGCTATATTCTCGCCTGAAACAGCCAGCTGATTAGGACTTCGAACACAACAAAGACAATCATTAATTGAAATTACAAGTAGCAGCGTGTTATTATATCATTTATCGAACGGCTATACATATACACCGGCACGTTCGCCGTAATTGGGGCTTCACTGGGAGGGCCAGCAACACGCTCGCTCATTGCCGGAGACCACAGCATCCCAATACTGCTTATGGCGATTGGCGGAGCTGGAATGATCAGTACCTCACAAAGCATCCTCGGCTAGCTGTTTCTGCGGCCTGAGTTCTGTGTCGAAGCGGTTGTACTGACGGTCTCGACGAGAGAATTACGGACGGATCGACGGAGAGCTGTCGCTGTCGGCGGCGGTCAGCCGCCGACGCGACAGCGTCGCCACTCACTCCGCTGGCTTGCTCGGTCGGTGG
GCGGAGCTCTATCAGTATAACACTTGCAGGGTGGTGTGTCGTCTAGAACACTTGCAGCTTGGTGTGGTGTTGAAAACACTTGCAGGGTGGTGTGGTCAAATACGCCGCGTACAATATTCTTTCACGTGGACTTGATCAAGTAGGAGTGATTCACTCCCATTCAATGCCTACGGAGACTGCGCTCTCTACGGGAACCGATTCGGTTCCTACAAAGCGCGTCTTGGAAACAGGAAGCCCCGTCCTCTGTGAGGCCGTAAGGTCGATCGGGGTGAGGTAGTTCACTTAGTGTAGGTTCAAGTTTTGTCTTATGAGTGATGGGCTTTCTATGTCTCTCGATTTGAGCTAGCAGGTCGATGCTTAGAGCTACACGTAAAACACCCCTCTATCGATGTGTAAACTTCCAGCTGAGCCTATCTATCGTCAGGACGCGATATATTCTCGTACAGACCATCTTCTCGGGCTTGTCAGAGATGGTCTCGTAGATCTGCTGGAGCGTCTCCTCAACGGTGAACAGGTTGTGCTTTCGAGGAACTCGTGGCTTTACTCAGTGAGACCGTAGAACTTCTAAGAGAGCCCTGTCGACGTATCCGACAGCGCCCGCTTTTTTTGGTGTTGTTTCCGGACTCTTCGAGTCGACCTCGAAACAGGCGAGTGGAGTCGGTTCGAAGCGTAGCCACTCATCCCTTTTTGTCGACTAACAGCACAGCGACTAAACGCAACTGCTCCATAATTGACCGCACCGATACTACTGAGCCAATATTAGTATTCGCTGGCTCTGCTGAAATCCTATTCTTCAGCTATATTCTCGCCTGAAACAGCCAGCTGATTAGGACTTCGAACACAACAAAGACAATCATTAATTGAAATTACAAGTAGCAGCGTGTTATTATATCATTTATCGAACGGCTATACATATACACCGGCACGTTCGCCGTAATTGGGGCTTCACTGGGAGGGCCAGCAACACGCTCGCTCATTGCCGGAGACCACAGCATCCCAATACTGCTTATGGCGATTGGCGGAGCTGGAATGATCAGTACCTCACAAAGCATCCTCGGCTAGCTGTTTCTGCGGCCTGAGTTCTGTGTCGAAGCGGTTGTACTGACGGTCTCGACGAGAGAATTACGGACGGATCGACGGAGAGCTGTCGCTGTCGGCGGCGGTCAGCCGCCGACGCGACAGCGTCGCCACTCACTCCGCTGGCTTGCTCGGTCGGTGG

ORB     AT-rich region
The information of repeat sequences

Motif AACACTTGCAGSGTGGTGT

StartP-valueSite
758.20e-12TGGTGTTGAAAACACTTGCAGGGTGGTGTGGTCAAATAC
198.20e-12CTATCAGTATAACACTTGCAGGGTGGTGTGTCGTCTAGA
474.62e-11TGTCGTCTAGAACACTTGCAGCTTGGTGTGGTGTTGAAA
8699.12e-10AATTGAAATTACAAGTAGCAGCGTGTTATTATATCATTT

Motif ACAGCRHAGCCACTCAHYVC

StartP-valueSite
11791.30e-09CGCCGACGCGACAGCGTCGCCACTCACTCCGCTGGCTTGC
6983.82e-09TTGTCGACTAACAGCACAGCGACTAAACGCAACTGCTCCA
6654.21e-09GAGTCGGTTCGAAGCGTAGCCACTCATCCCTTTTTGTCGA
8413.20e-08GACTTCGAACACAACAAAGACAATCATTAATTGAAATTAC
9844.36e-08TCATTGCCGGAGACCACAGCATCCCAATACTGCTTATGGC

Motif AAACABSCMGC

StartP-valueSite
8133.18e-07TTCTCGCCTGAAACAGCCAGCTGATTAGGAC
3734.32e-06GCTACACGTAAAACACCCCTCTATCGATGTG
2254.32e-06CGCGTCTTGGAAACAGGAAGCCCCGTCCTCT
3957.34e-06ATCGATGTGTAAACTTCCAGCTGAGCCTATC
987.71e-06TGGTGTGGTCAAATACGCCGCGTACAATATT

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010139 100.0 1219 0 0 1 1219 1 1219 0.0 2252