RefSeq NC_011832.1
DoriC accession number aORI10010058
OriC length 718 nt
OriC AT content 0.6309
The location of oriC region 2922641..441 nt
Browse in NCBI
OriC map
OriC sequences
CCTCTAACTCTCGTAACTGGAGGATATTAAATTTTTTTTCTTGATCTCTCTCCATGAGAAATAGTTAAAGTCCAATTAAGGGTTTCTTTTTACTCTTCATTCTGAAATCAGATAAACGCATCAAAAATTGGACGATTTTTCATGGAAAGGGACCCACCCCTTTATTTCCACTGGAAGTTTGTTCTCCTTCGATGACCCTTCTGGAAGTGAAGCATGATCACCTTCTATAACAATACAGATTGTTCCAGGTGATATGATGTGGTTATAAGGTTATTATTTATAGTATTAAATTCATAATTACTCAATGCTCGTATCTCATTTTTAGAGAAGAAGAGAATCTATCTCGTGTTCTCATGTTCCATAGGAAATAAAGGGGTGGGGGTACATTTTTTTGCTTCCAAGTGTTCTGATACCAAATTCAACAGATATTCCTGGGTGTTCTTCCAAATTAATCTAAAAATCCAGAGATCAGGAGATCATCTTCAGGGAAGATCGTGATCTCAATAATTCTCCAGTGGAAAAGAGGGGGTATATAAATTCCATAACTCTGATCAGATGAAACGCTCCACTATGATGGAAGTTTGAGATTCTCCACTGGAAATGAAGGGGTATCGATCGATTATCAGGTGATAAGCGATCATCTTAATAGAAACAGATAGCTAATGTACAGATTCCAGTGAACGAGATGCCTGAAGAAGAATGCGATCAGAACAGATCA
CCTCTAACTCTCGTAACTGGAGGATATTAAATTTTTTTTCTTGATCTCTCTCCATGAGAAATAGTTAAAGTCCAATTAAGGGTTTCTTTTTACTCTTCATTCTGAAATCAGATAAACGCATCAAAAATTGGACGATTTTTCATGGAAAGGGACCCACCCCTTTATTTCCACTGGAAGTTTGTTCTCCTTCGATGACCCTTCTGGAAGTGAAGCATGATCACCTTCTATAACAATACAGATTGTTCCAGGTGATATGATGTGGTTATAAGGTTATTATTTATAGTATTAAATTCATAATTACTCAATGCTCGTATCTCATTTTTAGAGAAGAAGAGAATCTATCTCGTGTTCTCATGTTCCATAGGAAATAAAGGGGTGGGGGTACATTTTTTTGCTTCCAAGTGTTCTGATACCAAATTCAACAGATATTCCTGGGTGTTCTTCCAAATTAATCTAAAAATCCAGAGATCAGGAGATCATCTTCAGGGAAGATCGTGATCTCAATAATTCTCCAGTGGAAAAGAGGGGGTATATAAATTCCATAACTCTGATCAGATGAAACGCTCCACTATGATGGAAGTTTGAGATTCTCCACTGGAAATGAAGGGGTATCGATCGATTATCAGGTGATAAGCGATCATCTTAATAGAAACAGATAGCTAATGTACAGATTCCAGTGAACGAGATGCCTGAAGAAGAATGCGATCAGAACAGATCA
CCTCTAACTCTCGTAACTGGAGGATATTAAATTTTTTTTCTTGATCTCTCTCCATGAGAAATAGTTAAAGTCCAATTAAGGGTTTCTTTTTACTCTTCATTCTGAAATCAGATAAACGCATCAAAAATTGGACGATTTTTCATGGAAAGGGACCCACCCCTTTATTTCCACTGGAAGTTTGTTCTCCTTCGATGACCCTTCTGGAAGTGAAGCATGATCACCTTCTATAACAATACAGATTGTTCCAGGTGATATGATGTGGTTATAAGGTTATTATTTATAGTATTAAATTCATAATTACTCAATGCTCGTATCTCATTTTTAGAGAAGAAGAGAATCTATCTCGTGTTCTCATGTTCCATAGGAAATAAAGGGGTGGGGGTACATTTTTTTGCTTCCAAGTGTTCTGATACCAAATTCAACAGATATTCCTGGGTGTTCTTCCAAATTAATCTAAAAATCCAGAGATCAGGAGATCATCTTCAGGGAAGATCGTGATCTCAATAATTCTCCAGTGGAAAAGAGGGGGTATATAAATTCCATAACTCTGATCAGATGAAACGCTCCACTATGATGGAAGTTTGAGATTCTCCACTGGAAATGAAGGGGTATCGATCGATTATCAGGTGATAAGCGATCATCTTAATAGAAACAGATAGCTAATGTACAGATTCCAGTGAACGAGATGCCTGAAGAAGAATGCGATCAGAACAGATCA

ORB     AT-rich region
The information of repeat sequences

Motif TKYTCCABDGGAAATGADGGGGT

StartP-valueSite
5881.72e-13AAGTTTGAGATTCTCCACTGGAAATGAAGGGGTATCGATCGAT
5087.27e-13ATCTCAATAATTCTCCAGTGGAAAAGAGGGGGTATATAAATTC
3551.04e-11CGTGTTCTCATGTTCCATAGGAAATAAAGGGGTGGGGGTACAT
2413.57e-11CAATACAGATTGTTCCAGGTGATATGATGTGGTTATAAGGTTA

Motif TGWTCWCYYTCBATRAS

StartP-valueSite
1803.92e-10ACTGGAAGTTTGTTCTCCTTCGATGACCCTTCTGGAA
423.43e-09TTTTTTTTCTTGATCTCTCTCCATGAGAAATAGTTAA
2153.86e-09AAGTGAAGCATGATCACCTTCTATAACAATACAGATT

Motif ACAGAT

StartP-valueSite
7113.34e-04TGCGATCAGAACAGATCA
6673.34e-04TAGCTAATGTACAGATTCCAGTGAAC
6523.34e-04CTTAATAGAAACAGATAGCTAATGTA
4223.34e-04ACCAAATTCAACAGATATTCCTGGGT
2353.34e-04CTATAACAATACAGATTGTTCCAGGT

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010058 100.0 718 0 0 1 718 1 718 0.0 1327