RefSeq NC_010482.1
DoriC accession number aORI10010056
OriC length 249 nt
OriC AT content 0.5984
The location of oriC region 1378666..1378914 nt
Browse in NCBI
OriC map
OriC sequences
TATGGAGTTGAAGATGTGTTATTTCAACTCCGAGCCTCACTTAATGGAGTTGATGGAGCTGAAATATGAGGGTCTCTCTCCCGGCTCGGAGTTGATGGAGCTGAAATATATCACATACTCATTATCATATGTTTCCTCACAATGAATGTGATATAATACTTTCATAATACTTCATTTTAAAAAGGCATCAAGTTTAAAGGTGGAGTTGATGTCTATCATATTCAGGTCTGGGCGGAGGGGAAGCCGTGG
TATGGAGTTGAAGATGTGTTATTTCAACTCCGAGCCTCACTTAATGGAGTTGATGGAGCTGAAATATGAGGGTCTCTCTCCCGGCTCGGAGTTGATGGAGCTGAAATATATCACATACTCATTATCATATGTTTCCTCACAATGAATGTGATATAATACTTTCATAATACTTCATTTTAAAAAGGCATCAAGTTTAAAGGTGGAGTTGATGTCTATCATATTCAGGTCTGGGCGGAGGGGAAGCCGTGG
TATGGAGTTGAAGATGTGTTATTTCAACTCCGAGCCTCACTTAATGGAGTTGATGGAGCTGAAATATGAGGGTCTCTCTCCCGGCTCGGAGTTGATGGAGCTGAAATATATCACATACTCATTATCATATGTTTCCTCACAATGAATGTGATATAATACTTTCATAATACTTCATTTTAAAAAGGCATCAAGTTTAAAGGTGGAGTTGATGTCTATCATATTCAGGTCTGGGCGGAGGGGAAGCCGTGG
ORB     AT-rich region
The information of repeat sequences

Motif YGGAGTTGAWG

StartP-valueSite
873.28e-07TCTCCCGGCTCGGAGTTGATGGAGCTGAAAT
2019.68e-07AGTTTAAAGGTGGAGTTGATGTCTATCATAT
459.68e-07CCTCACTTAATGGAGTTGATGGAGCTGAAAT
31.83e-06TATGGAGTTGAAGATGTGTTATT
2335.35e-06CAGGTCTGGGCGGAGGGGAAGCCGTGG

Motif CCTCAC

StartP-valueSite
1356.12e-05TCATATGTTTCCTCACAATGAATGTG
356.12e-05CAACTCCGAGCCTCACTTAATGGAGT

Motif GAGCTGAAATA

StartP-valueSite
983.97e-07GGAGTTGATGGAGCTGAAATATATCACATAC
563.97e-07GGAGTTGATGGAGCTGAAATATGAGGGTCTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010056 100.0 249 0 0 1 249 1 249 0.0 460