RefSeq NC_010364.1
DoriC accession number aORI10010133
OriC length 228 nt
OriC AT content 0.5088
The location of oriC region 38987..39214 nt
Browse in NCBI
OriC map
OriC sequences
CCGGTATTCCCATGCAAGGAAGCCGCGCCGTTCACGGCGCGGAGGATGTCACTGTTGGGTATTAGGTTTTCAGCCAGAGGAGGATATGTTACTGATTCACTTGTATTGGTGGTGTGTTGTTCTTCTAGTTCCTCACGTTTCGATTCACTTGCAACAGTGGTGTGTGGGTGTTCACTTGCATCAGGTGAAACGGTGGTTTTATTATCCTCTCTCGGGGTCTTGCTATCA
CCGGTATTCCCATGCAAGGAAGCCGCGCCGTTCACGGCGCGGAGGATGTCACTGTTGGGTATTAGGTTTTCAGCCAGAGGAGGATATGTTACTGATTCACTTGTATTGGTGGTGTGTTGTTCTTCTAGTTCCTCACGTTTCGATTCACTTGCAACAGTGGTGTGTGGGTGTTCACTTGCATCAGGTGAAACGGTGGTTTTATTATCCTCTCTCGGGGTCTTGCTATCA
CCGGTATTCCCATGCAAGGAAGCCGCGCCGTTCACGGCGCGGAGGATGTCACTGTTGGGTATTAGGTTTTCAGCCAGAGGAGGATATGTTACTGATTCACTTGTATTGGTGGTGTGTTGTTCTTCTAGTTCCTCACGTTTCGATTCACTTGCAACAGTGGTGTGTGGGTGTTCACTTGCATCAGGTGAAACGGTGGTTTTATTATCCTCTCTCGGGGTCTTGCTATCA
ORB     AT-rich region
The information of repeat sequences

Motif ATTCACTTGCAW

StartP-valueSite
1432.81e-08TCACGTTTCGATTCACTTGCAACAGTGGTGTG
62.69e-07CCGGTATTCCCATGCAAGGAAGCCGCG
1705.62e-07GTGTGTGGGTGTTCACTTGCATCAGGTGAAAC
955.62e-07TATGTTACTGATTCACTTGTATTGGTGGTGTG

Motif CASSSMGMGGAGGA

StartP-valueSite
714.58e-09ATTAGGTTTTCAGCCAGAGGAGGATATGTTACTG
332.67e-08CCGCGCCGTTCACGGCGCGGAGGATGTCACTGTT

Motif GAARCSG

StartP-valueSite
1874.17e-05TGCATCAGGTGAAACGGTGGTTTTATT
197.08e-05CCCATGCAAGGAAGCCGCGCCGTTCAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010133 100.0 228 0 0 1 228 1 228 0.0 422