RefSeq NC_009440.1
DoriC accession number aORI10010042
OriC length 396 nt
OriC AT content 0.6667
The location of oriC region 432754..433149 nt
Browse in NCBI
OriC map
OriC sequences
GTTTTACTTTATTATTCTACTTTATAAATGTTTATGACTAGAGGATTCGACTTCGCGATTTTTCAGAGAATTGTTACAAGTTAGTTGAGGAACAACCAGAGAATAGTCCAGATTGGGGATAGTTTGCGTTGCATGGTATTAGTTAAGGAATTAATTGAATATCAAATCAAACTGACGTAATGTGATAAAGTGAAAACTAAATCATATATATGGACTTTGTTGCTCCAGCCCTTGTATTTCCCTTAACCTTCATGAATCTAGTATTTTCTAGTATTTTAGGAATGCGCTATACAAGTTCATATCTGTTTATTATCTCTCCGCAGGAATCGTTTGAATTACGATGTAACCGAAATTGTCTAAAAGGGGAAGGAATTTGGATTGAAACAAAGAGTCACA
GTTTTACTTTATTATTCTACTTTATAAATGTTTATGACTAGAGGATTCGACTTCGCGATTTTTCAGAGAATTGTTACAAGTTAGTTGAGGAACAACCAGAGAATAGTCCAGATTGGGGATAGTTTGCGTTGCATGGTATTAGTTAAGGAATTAATTGAATATCAAATCAAACTGACGTAATGTGATAAAGTGAAAACTAAATCATATATATGGACTTTGTTGCTCCAGCCCTTGTATTTCCCTTAACCTTCATGAATCTAGTATTTTCTAGTATTTTAGGAATGCGCTATACAAGTTCATATCTGTTTATTATCTCTCCGCAGGAATCGTTTGAATTACGATGTAACCGAAATTGTCTAAAAGGGGAAGGAATTTGGATTGAAACAAAGAGTCACA
GTTTTACTTTATTATTCTACTTTATAAATGTTTATGACTAGAGGATTCGACTTCGCGATTTTTCAGAGAATTGTTACAAGTTAGTTGAGGAACAACCAGAGAATAGTCCAGATTGGGGATAGTTTGCGTTGCATGGTATTAGTTAAGGAATTAATTGAATATCAAATCAAACTGACGTAATGTGATAAAGTGAAAACTAAATCATATATATGGACTTTGTTGCTCCAGCCCTTGTATTTCCCTTAACCTTCATGAATCTAGTATTTTCTAGTATTTTAGGAATGCGCTATACAAGTTCATATCTGTTTATTATCTCTCCGCAGGAATCGTTTGAATTACGATGTAACCGAAATTGTCTAAAAGGGGAAGGAATTTGGATTGAAACAAAGAGTCACA

ORB     AT-rich region
The information of repeat sequences

Motif CTYCGC

StartP-valueSite
3162.72e-05TTTATTATCTCTCCGCAGGAATCGTT
519.37e-05GAGGATTCGACTTCGCGATTTTTCAG

Motif AGGAAT

StartP-valueSite
3684.13e-04TAAAAGGGGAAGGAATTTGGATTGAA
3224.13e-04ATCTCTCCGCAGGAATCGTTTGAATT
2784.13e-04CTAGTATTTTAGGAATGCGCTATACA
1464.13e-04GTATTAGTTAAGGAATTAATTGAATA
885.81e-04AAGTTAGTTGAGGAACAACCAGAGAA

Motif CAGAGAA

StartP-valueSite
975.35e-05GAGGAACAACCAGAGAATAGTCCAGAT
645.35e-05CGCGATTTTTCAGAGAATTGTTACAAG

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010042 100.0 396 0 0 1 396 1 396 0.0 732